RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OR2G2Q8NGZ5 317 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 C17orf50Q8WW18 174 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 SLAMF9Q96A28 289 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 MRPL48Q96GC5 212 aaKnown RBP10.38□□□□□ -0.75
PTPRF-214ENST00000496043 SNX22Q96L94 193 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 MYCBPQ99417 103 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-214ENST00000496043 PPA2Q9H2U2 334 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 SEBOXQ9HB31 216 aaPredicted RBP10.38□□□□□ -0.75
PTPRF-214ENST00000496043 TCF7L1Q9HCS4 588 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 C17orf98A8MV24 154 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 F8VVB4 439 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 F8VWA3 439 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 H3BUX3 64 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 EI24O14681 340 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 WIPF1O43516 503 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 HTR1AP08908 422 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 PIPP12273 146 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-214ENST00000496043 CCL3L1P16619 93 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 ATF1P18846 271 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 PRKACBP22694 351 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 MTCP1P56278 107 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 OR12D2P58182 307 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF273Q14593 569 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 LRRC75BQ2VPJ9 315 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 ASPHD2Q6ICH7 369 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 FDX2Q6P4F2 183 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 UTS2BQ765I0 119 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 GDPD3Q7L5L3 318 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 Q8IYB0 196 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 ENTHD1Q8IYW4 607 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 ACBD7Q8N6N7 88 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-214ENST00000496043 FGGYQ96C11 551 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 AJUBAQ96IF1 538 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 FRRS1LQ9P0K9 344 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 FBLN5Q9UBX5 448 aa10.37□□□□□ -0.75
PTPRF-214ENST00000496043 EXOGQ9Y2C4 368 aaKnown RBP10.37□□□□□ -0.75
PTPRF-214ENST00000496043 E9PQ18 207 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 H3BNX3 289 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 J3QLW9 94 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 J3QRE1 110 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 SLC16A6O15403 523 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF737O75373 536 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 ISG15P05161 165 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 OCM2P0CE71 109 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 OCMP0CE72 109 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF19P17023 458 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF20P17024 532 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 COX7A1P24310 79 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 PEX2P28328 305 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 CCR9P51686 369 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 EDDM3BP56851 147 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 MEF2CQ06413 473 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-214ENST00000496043 LY6EQ16553 131 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 CBR4Q8N4T8 237 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 DTX3Q8N9I9 347 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 OR13D1Q8NGV5 346 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 EMG1Q92979 244 aaKnown RBP10.36□□□□□ -0.75
PTPRF-214ENST00000496043 ADAT3Q96EY9 351 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-214ENST00000496043 RAB18Q9NP72 206 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 GLS2Q9UI32 602 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 GMPPBQ9Y5P6 360 aa10.36□□□□□ -0.75
PTPRF-214ENST00000496043 hADV38S2A0JD32 116 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 MPZL2O60487 215 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 RBP4P02753 201 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 RPSAP08865 295 aaKnown RBP10.35□□□□□ -0.75
PTPRF-214ENST00000496043 AZGP1P25311 298 aaKnown RBP10.35□□□□□ -0.75
PTPRF-214ENST00000496043 GABRA5P31644 462 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 KIR2DS4P43632 304 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 BMXP51813 675 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 DLX6P56179 175 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 NANOS3P60323 173 aaKnown RBP10.35□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF782Q6ZMW2 699 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-214ENST00000496043 LHFPL2Q6ZUX7 228 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 OR8H2Q8N162 312 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 FAM58AQ8N1B3 248 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 PPP1R35Q8TAP8 253 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 MALSU1Q96EH3 234 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 Q96MT0 163 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 MBOAT4Q96T53 435 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 C9orf16Q9BUW7 83 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 NEK6Q9HC98 313 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 HHLA2Q9UM44 414 aa10.35□□□□□ -0.75
PTPRF-214ENST00000496043 IGKV1-9A0A0C4DH69 117 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 TMEM82A0PJX8 343 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 FAM90A8PA6NJQ4 464 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 SH2D1BO14796 132 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 HAND1O96004 215 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 ARG1P05089 322 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 GABRR1P24046 479 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 NPBWR2P48146 333 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 POU3F4P49335 361 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 ACTA2P62736 377 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 ACTG2P63267 376 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 PDZK1IP1Q13113 114 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 ALKBH1Q13686 389 aaKnown RBP10.34□□□□□ -0.75
PTPRF-214ENST00000496043 GALEQ14376 348 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF146Q15072 292 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 GRK1Q15835 563 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms