RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TMEM89A2RUT3 159 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 CASQ2O14958 399 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 ZFPL1O95159 310 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 RNASE1P07998 156 aaKnown RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 CHRM2P08172 466 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 LIMS3P0CW19 117 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 LIMS4P0CW20 117 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 CAPGP40121 348 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 POU3F4P49335 361 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 RPL31P62899 125 aaKnown RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 ADARB1P78563 741 aaKnown RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 GABPB1Q06547 395 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 CCDC58Q4VC31 144 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 METAP1DQ6UB28 335 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 SERPINA12Q8IW75 414 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 ASCC1Q8N9N2 400 aaKnown RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 OR51A4Q8NGJ6 313 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 OR5D13Q8NGL4 314 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 EMG1Q92979 244 aaKnown RBP14.52□□□□□ -0.09
HDAC4-211ENST00000494800 DUX5Q96PT3 197 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 ZCCHC4Q9H5U6 513 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 SIRT7Q9NRC8 400 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 MTCH1Q9NZJ7 389 aa14.52□□□□□ -0.09
HDAC4-211ENST00000494800 HOXA3O43365 443 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-211ENST00000494800 INMTO95050 263 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 MT-ND2P03891 347 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 CEBPDP49716 269 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-211ENST00000494800 COMPP49747 757 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-211ENST00000494800 SLC9A3R2Q15599 337 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 RPL22L1Q6P5R6 122 aaKnown RBP14.51□□□□□ -0.09
HDAC4-211ENST00000494800 PDZD9Q8IXQ8 264 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 OR13C9Q8NGT0 318 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 OR10AC1Q8NH08 325 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 TMEM80Q96HE8 168 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 ZNF649Q9BS31 505 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 PRDM13Q9H4Q3 707 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 ELL3Q9HB65 397 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-211ENST00000494800 DIMT1Q9UNQ2 313 aaKnown RBP14.51□□□□□ -0.09
HDAC4-211ENST00000494800 PCDHGB5Q9Y5G0 923 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 STAB1Q9NY15 2570 aa14.51□□□□□ -0.09
HDAC4-211ENST00000494800 IGKV1-9A0A0C4DH69 117 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 MDFIC2A0A1B0GVS7 189 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 E9PI62 339 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 MAGEB3O15480 346 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 TK1P04183 234 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 CD2P06729 351 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 HCKP08631 526 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 ETV1P50549 477 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 FOXL1Q12952 345 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 TMEM86BQ8N661 226 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 C3orf56Q8N813 242 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 ZSCAN4Q8NAM6 433 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-211ENST00000494800 PDCD1LG2Q9BQ51 273 aa14.5□□□□□ -0.09
HDAC4-211ENST00000494800 SOX21Q9Y651 276 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-211ENST00000494800 EFCAB10A6NFE3 127 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 K7N7A8 449 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 SULT1B1O43704 296 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 HKR1P10072 659 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 COL10A1Q03692 680 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 SLC34A1Q06495 639 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 PDZK1IP1Q13113 114 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 SPIN3Q5JUX0 258 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 Q6YL49 198 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 GDPD3Q7L5L3 318 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 FAM58AQ8N1B3 248 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 PARP16Q8N5Y8 322 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 Q8N7P7 452 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 GPR148Q8TDV2 347 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 SSMEM1Q8WWF3 244 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 C1orf147Q96MC9 270 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-211ENST00000494800 UNKLQ9H9P5 680 aaKnown RBP14.49□□□□□ -0.09
HDAC4-211ENST00000494800 RHOFQ9HBH0 211 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 C19orf12Q9NSK7 152 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 BABAM2Q9NXR7 383 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 POMT1Q9Y6A1 747 aa14.49□□□□□ -0.09
HDAC4-211ENST00000494800 ALX3O95076 343 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 PAHP00439 452 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 CRYBA1P05813 215 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 FBP1P09467 338 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 PIPP12273 146 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-211ENST00000494800 PRKACAP17612 351 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 UBE2E1P51965 193 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 GTF2A1P52655 376 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-211ENST00000494800 CDK5R1Q15078 307 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 C16orf87Q6PH81 154 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 OR4M1Q8NGD0 313 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 OR52N1Q8NH53 320 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 PPP1R35Q8TAP8 253 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 RFT1Q96AA3 541 aa14.48□□□□□ -0.09
HDAC4-211ENST00000494800 SEBOXQ9HB31 216 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-211ENST00000494800 RBFOX1Q9NWB1 397 aaKnown RBP14.48□□□□□ -0.09
HDAC4-211ENST00000494800 CNOT2Q9NZN8 540 aaKnown RBP14.48□□□□□ -0.09
HDAC4-211ENST00000494800 SF3B6Q9Y3B4 125 aaKnown RBP14.48□□□□□ -0.09
HDAC4-211ENST00000494800 A0A0U1RQK1 487 aa14.47□□□□□ -0.09
HDAC4-211ENST00000494800 BTBD17A6NE02 478 aa14.47□□□□□ -0.09
HDAC4-211ENST00000494800 F8VVB4 439 aa14.47□□□□□ -0.09
HDAC4-211ENST00000494800 F8VWA3 439 aa14.47□□□□□ -0.09
HDAC4-211ENST00000494800 RNASEK-C17orf49H0YIS7 233 aa14.47□□□□□ -0.09
HDAC4-211ENST00000494800 NPFFO15130 113 aa14.47□□□□□ -0.09
HDAC4-211ENST00000494800 SPRY1O43609 319 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms