RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ACTA2P62736 377 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 ACTG2P63267 376 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 ACTC1P68032 377 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 ACTA1P68133 377 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 SLC34A1Q06495 639 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 MFGE8Q08431 387 aaPredicted RBP11.73□□□□□ -0.53
PCCB-219ENST00000494742 ELMOD2Q8IZ81 293 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 OR14K1Q8NGZ2 314 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 ASB9Q96DX5 294 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 SNX22Q96L94 193 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 LRGUKQ96M69 825 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 MNTQ99583 582 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 LIN7BQ9HAP6 207 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 GPR173Q9NS66 373 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 IKZF2Q9UKS7 526 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 HILPDAQ9Y5L2 63 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 LINC00312Q9Y6C7 94 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 COL7A1Q02388 2944 aa11.73□□□□□ -0.53
PCCB-219ENST00000494742 A0A1B0GTI1 187 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 PRR32B1ATL7 298 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 B2RBV5 119 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 PF4P02776 101 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 ESRRGP62508 458 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 SNAPC1Q16533 368 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 BCL2L15Q5TBC7 163 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 CENPVQ7Z7K6 275 aaPredicted RBP11.72□□□□□ -0.53
PCCB-219ENST00000494742 TMEM179BQ7Z7N9 219 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 ZNF676Q8N7Q3 588 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 DNAJC9Q8WXX5 260 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 CEP19Q96LK0 163 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 CLEC7AQ9BXN2 247 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 COPS3Q9UNS2 423 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 SLC7A11Q9UPY5 501 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 SESN1Q9Y6P5 492 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 R4GMQ9 66 aa11.72□□□□□ -0.53
PCCB-219ENST00000494742 IGHV2-26A0A0B4J1V2 119 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 A0A1W2PRX2 142 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 CCDC182A6NF36 153 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 CLIC3O95833 236 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 MRPL3P09001 348 aaKnown RBP11.71□□□□□ -0.53
PCCB-219ENST00000494742 CCL1P22362 96 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 HTR1DP28221 377 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 ARHGDIBP52566 201 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 TMEM95Q3KNT9 176 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 ZNF322Q6U7Q0 402 aaPredicted RBP11.71□□□□□ -0.53
PCCB-219ENST00000494742 TCF23Q7RTU1 214 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 ANGPTL5Q86XS5 388 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 ENTHD1Q8IYW4 607 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 ADGRG5Q8IZF4 528 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 NDNFQ8TB73 568 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 CNN2Q99439 309 aaKnown RBP11.71□□□□□ -0.53
PCCB-219ENST00000494742 GPR61Q9BZJ8 451 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 MTCH1Q9NZJ7 389 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 OR52A1Q9UKL2 312 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 GTF2A1LQ9UNN4 478 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 SNX5Q9Y5X3 404 aa11.71□□□□□ -0.53
PCCB-219ENST00000494742 KMT2CQ8NEZ4 4911 aaKnown RBP11.7□□□□□ -0.54
PCCB-219ENST00000494742 PEX2P28328 305 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 BRS3P32247 399 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 EGFEM1PQ0D2K5 195 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 TCTEX1D4Q5JR98 221 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 SLX4IPQ5VYV7 408 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 TMEM236Q5W0B7 351 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 OR52W1Q6IF63 320 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 Q8IYB0 196 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 NSL1Q96IY1 281 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 PRRG3Q9BZD7 231 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 TVP23BQ9NYZ1 205 aa11.7□□□□□ -0.54
PCCB-219ENST00000494742 FAM230AA0A1W2PPH8 454 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 AQP12BA6NM10 295 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 JUNBP17275 347 aaPredicted RBP11.69□□□□□ -0.54
PCCB-219ENST00000494742 ERP29P30040 261 aaKnown RBP11.69□□□□□ -0.54
PCCB-219ENST00000494742 FUT6P51993 359 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 CXCR4P61073 352 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 DCTN2Q13561 401 aaKnown RBP11.69□□□□□ -0.54
PCCB-219ENST00000494742 DEFB121Q5J5C9 76 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 CCDC121Q6ZUS5 278 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 RTN4RL2Q86UN3 420 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 EGFL6Q8IUX8 553 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 AQP12AQ8IXF9 295 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 CCDC54Q8NEL0 328 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 CANT1Q8WVQ1 401 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 MYDGFQ969H8 173 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 APOL4Q9BPW4 351 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 CADM1Q9BY67 442 aaKnown RBP11.69□□□□□ -0.54
PCCB-219ENST00000494742 TTTY10Q9BZA0 68 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 PLEKHA1Q9HB21 404 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 DPM3Q9P2X0 92 aa11.69□□□□□ -0.54
PCCB-219ENST00000494742 UBE2J1Q9Y385 318 aaPredicted RBP11.69□□□□□ -0.54
PCCB-219ENST00000494742 TMEM82A0PJX8 343 aa11.68□□□□□ -0.54
PCCB-219ENST00000494742 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
PCCB-219ENST00000494742 A6NIN4 97 aa11.68□□□□□ -0.54
PCCB-219ENST00000494742 E9PQ18 207 aa11.68□□□□□ -0.54
PCCB-219ENST00000494742 ZNF670-ZNF695F2Z2N8 137 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms