RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 R4GMQ9 66 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 V9GYS6 101 aa10.18□□□□□ -0.78
SKA1-205ENST00000494518 AQP12BA6NM10 295 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 VGLL3A8MV65 326 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 K7N7A8 449 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 DLGAP1O14490 977 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 ATP8B1O43520 1251 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 FKBP6O75344 327 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 IGHV1-8P0DP01 117 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 ANXA8P13928 327 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 VDAC2P45880 294 aaPredicted RBP10.17□□□□□ -0.78
SKA1-205ENST00000494518 CRISP1P54107 249 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 SNU13P55769 128 aaKnown RBP10.17□□□□□ -0.78
SKA1-205ENST00000494518 LOXL3P58215 753 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 EMX1Q04741 257 aaPredicted RBP10.17□□□□□ -0.78
SKA1-205ENST00000494518 SLC34A1Q06495 639 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 ZNF626Q68DY1 528 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 GDPD3Q7L5L3 318 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 AQP12AQ8IXF9 295 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 ELMOD2Q8IZ81 293 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 Q8N2B8 174 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 OR4F17Q8NGA8 305 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 NDNFQ8TB73 568 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 OR4F4Q96R69 305 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 CHST6Q9GZX3 395 aa10.17□□□□□ -0.78
SKA1-205ENST00000494518 PAPOLBQ9NRJ5 636 aaKnown RBP10.17□□□□□ -0.78
SKA1-205ENST00000494518 MRM2Q9UI43 246 aaKnown RBP10.17□□□□□ -0.78
SKA1-205ENST00000494518 IGKV1-27A0A075B6S5 117 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 TMEM82A0PJX8 343 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 MITFO75030 526 aaPredicted RBP10.16□□□□□ -0.78
SKA1-205ENST00000494518 ZNF737O75373 536 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 APOL3O95236 402 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 MPIG6BO95866 241 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 IGHA1P01876 353 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 CALCBP10092 127 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 IGLL1P15814 213 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 CD24P25063 80 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 MPZP25189 248 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 DAPP51397 102 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ERVK11-1P61568 191 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ACTA2P62736 377 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ACTG2P63267 376 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ACTC1P68032 377 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ACTA1P68133 377 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 PTGES3Q15185 160 aaKnown RBP10.16□□□□□ -0.78
SKA1-205ENST00000494518 FOXB2Q5VYV0 432 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 MEPCEQ7L2J0 689 aaKnown RBP10.16□□□□□ -0.78
SKA1-205ENST00000494518 SSX6Q7RTT6 188 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ZNF676Q8N7Q3 588 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 TCEANCQ8N8B7 351 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 WIPF2Q8TF74 440 aaPredicted RBP10.16□□□□□ -0.78
SKA1-205ENST00000494518 MALSU1Q96EH3 234 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ZNF714Q96N38 554 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 MOB1AQ9H8S9 216 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 PLEKHA1Q9HB21 404 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 ADGRL4Q9HBW9 690 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 MTCH1Q9NZJ7 389 aa10.16□□□□□ -0.78
SKA1-205ENST00000494518 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.16□□□□□ -0.78
SKA1-205ENST00000494518 FAM172BPA6NC97 362 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 ZNF670-ZNF695F2Z2N8 137 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 CHRM2P08172 466 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 CD33P20138 364 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 GABRR1P24046 479 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 DUSP1P28562 367 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 EPHA2P29317 976 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 OR12D2P58182 307 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 IL24Q13007 206 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 FLOT2Q14254 428 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 UBE2V2Q15819 145 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 BAIAP2L2Q6UXY1 529 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 OR8H2Q8N162 312 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 YIPF7Q8N8F6 280 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 DTX3Q8N9I9 347 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 OR11H6Q8NGC7 330 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 EMG1Q92979 244 aaKnown RBP10.15□□□□□ -0.78
SKA1-205ENST00000494518 CEP19Q96LK0 163 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 IL4I1Q96RQ9 567 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 PKIBQ9C010 78 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 WNT10AQ9GZT5 417 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 DNAJB9Q9UBS3 223 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 PITPNC1Q9UKF7 332 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 SLC7A11Q9UPY5 501 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 ZNF281Q9Y2X9 895 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 SNX5Q9Y5X3 404 aa10.15□□□□□ -0.78
SKA1-205ENST00000494518 IGHV2-26A0A0B4J1V2 119 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 SH2D7A6NKC9 451 aaPredicted RBP10.14□□□□□ -0.79
SKA1-205ENST00000494518 SYT7O43581 403 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 MMP23AO75900 390 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 PF4V1P10720 104 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 GRK1Q15835 563 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 CCDC121Q6ZUS5 278 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 SLC25A26Q70HW3 274 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 EGFL6Q8IUX8 553 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 CCDC197Q8NCU1 140 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 OR5AU1Q8NGC0 362 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 OR52N4Q8NGI2 321 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 ITFG2Q969R8 447 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 RBFOX1Q9NWB1 397 aaKnown RBP10.14□□□□□ -0.79
SKA1-205ENST00000494518 CLN6Q9NWW5 311 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 H2AFY2Q9P0M6 372 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms