RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 S100A13Q99584 98 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 SLC25A21Q9BQT8 299 aaPredicted RBP5.78□□□□□ -1.48
MSH5-217ENST00000494458 PAPOLGQ9BWT3 736 aaKnown RBP5.78□□□□□ -1.48
MSH5-217ENST00000494458 CHST6Q9GZX3 395 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 PLK3Q9H4B4 646 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 ZGRF1Q86YA3 2104 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 PRR14LQ5THK1 2151 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 CHD8Q9HCK8 2581 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 hCG_2014768A0A024R1R8 64 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 DPRXA6NFQ7 191 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ZNF736B4DX44 427 aaPredicted RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 F8VVB4 439 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 F8VWA3 439 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 GEMIN2O14893 280 aaKnown RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 PRAF2O60831 178 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 PFDN1O60925 122 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 PDCD6O75340 191 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 PEX14O75381 377 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 HTR3BO95264 441 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 NAPSAO96009 420 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 CYB5AP00167 134 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 MT-ND4P03905 459 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 CSTBP04080 98 aaKnown RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 PGA5P0DJD9 388 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 FUT3P21217 361 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 CA6P23280 308 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 LMO1P25800 156 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 CD200P41217 278 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 GATA4P43694 442 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 HAAOP46952 286 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 CCR6P51684 374 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ADORA2A-AS1P86434 159 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 PAX5Q02548 391 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 MAB21L1Q13394 359 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ZNF146Q15072 292 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 RBMS2Q15434 407 aaKnown RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 TAF9Q16594 264 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 TATDN3Q17R31 274 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 SPATA46Q5T0L3 261 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 SHEQ5VZ18 495 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ZNF660Q6AZW8 331 aaPredicted RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 SFRP4Q6FHJ7 346 aaPredicted RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 Q6P435 159 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 DHRS11Q6UWP2 260 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 SLC25A26Q70HW3 274 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 OVCH2Q7RTZ1 564 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ZNF554Q86TJ5 538 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 LHFPL1Q86WI0 220 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 Q8IYB0 196 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 FBXL14Q8N1E6 418 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 GVQW1Q8N7I0 195 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 OR10AD1Q8NGE0 317 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 OR13C8Q8NGS7 320 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 OR13G1Q8NGZ3 307 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 EMG1Q92979 244 aaKnown RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 CYYR1Q96J86 154 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ST6GAL2Q96JF0 529 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 HIST1H2AAQ96QV6 131 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 SLC6A7Q99884 636 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 MICU1Q9BPX6 476 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 NRIP2Q9BQI9 281 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 RTL8AQ9BWD3 113 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 C1QTNF6Q9BXI9 259 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ZNF442Q9H7R0 627 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ZMAT3Q9HA38 289 aaKnown RBP5.77□□□□□ -1.49
MSH5-217ENST00000494458 TMEM100Q9NV29 134 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 TREM2Q9NZC2 230 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 EDARQ9UNE0 448 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ST3GAL6Q9Y274 331 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 ITPR1Q14643 2758 aa5.77□□□□□ -1.49
MSH5-217ENST00000494458 A0A0A6YYJ9 748 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 A0A1B0GUH1 482 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 SNRPGP15A8MWD9 76 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 SYNGR1O43759 233 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 RAB3DO95716 219 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 DHFRP00374 187 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 LHBP01229 141 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 CRYAAP02489 173 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 BCL3P20749 454 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 CHRNB4P30926 498 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 ASCL1P50553 236 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 GNG2P59768 71 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 SORDQ00796 357 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 DHODHQ02127 395 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 TFF3Q07654 80 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 ZNF154Q13106 437 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 GRK1Q15835 563 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 PIGYQ3MUY2 71 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 ACTBL2Q562R1 376 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 ZNF880Q6PDB4 577 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 Q6ZPA2 131 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 NCCRP1Q6ZVX7 275 aaPredicted RBP5.76□□□□□ -1.49
MSH5-217ENST00000494458 C6orf201Q7Z4U5 140 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 TRAPPC6BQ86SZ2 158 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 PEG10Q86TG7 708 aaKnown RBP5.76□□□□□ -1.49
MSH5-217ENST00000494458 ARRDC1Q8N5I2 433 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 SCCPDHQ8NBX0 429 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 CHST4Q8NCG5 386 aa5.76□□□□□ -1.49
MSH5-217ENST00000494458 OR51S1Q8NGJ8 323 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms