RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 MAB21L2Q9Y586 359 aa9.65□□□□□ -0.86
UBA3-211ENST00000493957 IGHV3OR16-10A0A075B7F0 116 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 A0A1W2PPK0 400 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 MAGEA13PA6NCF6 341 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 NKX6-3A6NJ46 265 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 RFPL4AA6NLU0 287 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 RFPL4AL1F8VTS6 287 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 J3QLI3 93 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 SIGLEC5O15389 551 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 RGS10O43665 173 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 SULT1B1O43704 296 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 FSHBP01225 129 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 ACAA1P09110 424 aaPredicted RBP9.64□□□□□ -0.87
UBA3-211ENST00000493957 OCM2P0CE71 109 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 CELP19835 753 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 PCMT1P22061 227 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 PRKACBP22694 351 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 CPT2P23786 658 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 RBP2P50120 134 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 ATP1B3P54709 279 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 SNU13P55769 128 aaKnown RBP9.64□□□□□ -0.87
UBA3-211ENST00000493957 ZP1P60852 638 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 PAX8Q06710 450 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 SMIM21Q3B7S5 101 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 KLF17Q5JT82 389 aaPredicted RBP9.64□□□□□ -0.87
UBA3-211ENST00000493957 RNLSQ5VYX0 342 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 LHFPL2Q6ZUX7 228 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 BTN2A1Q7KYR7 527 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 C1QL2Q7Z5L3 287 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 SERPINA12Q8IW75 414 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 ZNRF1Q8ND25 227 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 TMEM106AQ96A25 262 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 SPSB1Q96BD6 273 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 CEP19Q96LK0 163 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 OR14A2Q96R54 314 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 MND1Q9BWT6 205 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 RBFOX1Q9NWB1 397 aaKnown RBP9.64□□□□□ -0.87
UBA3-211ENST00000493957 OR14J1Q9UGF5 321 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 ERGIC3Q9Y282 383 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 TPRKBQ9Y3C4 175 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 AUP1Q9Y679 476 aa9.64□□□□□ -0.87
UBA3-211ENST00000493957 TRAV8-7A0A075B6U6 113 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 KIR2DS1A0A191URI9 304 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 NDUFB3O43676 98 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 RGS9O75916 674 aaPredicted RBP9.63□□□□□ -0.87
UBA3-211ENST00000493957 SFTPBP07988 381 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 HCKP08631 526 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 OCMP0CE72 109 aaPredicted RBP9.63□□□□□ -0.87
UBA3-211ENST00000493957 GATA3P23771 443 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 DUSP1P28562 367 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 NPY4RP50391 375 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 DLX1P56177 255 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 FGF12P61328 243 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 IL13RA1P78552 427 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 PDZK1IP1Q13113 114 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 SPHARQ15513 63 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 SLC36A1Q7Z2H8 476 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 TMEM185AQ8NFB2 350 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 OR52N4Q8NGI2 321 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 OR5D14Q8NGL3 314 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 H1FXQ92522 213 aaKnown RBP9.63□□□□□ -0.87
UBA3-211ENST00000493957 CCDC90BQ9GZT6 254 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 RASL12Q9NYN1 266 aa9.63□□□□□ -0.87
UBA3-211ENST00000493957 SLC25A10Q9UBX3 287 aaPredicted RBP9.63□□□□□ -0.87
UBA3-211ENST00000493957 RPUSD1Q9UJJ7 312 aaKnown RBP9.63□□□□□ -0.87
UBA3-211ENST00000493957 SOX21Q9Y651 276 aaPredicted RBP9.63□□□□□ -0.87
UBA3-211ENST00000493957 TRBV5-7A0A0A0MS05 114 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 GABRPO00591 440 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 PIN1P1O15428 100 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 ENSAO43768 121 aaKnown RBP9.62□□□□□ -0.87
UBA3-211ENST00000493957 IGHV4-38-2P0DP08 117 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 IGFBP3P17936 291 aaPredicted RBP9.62□□□□□ -0.87
UBA3-211ENST00000493957 RAB3AP20336 220 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 PRDX2P32119 198 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 TAS2R43P59537 309 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
UBA3-211ENST00000493957 MED22Q15528 200 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 KISS1Q15726 138 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 RBM48Q5RL73 367 aaKnown RBP9.62□□□□□ -0.87
UBA3-211ENST00000493957 FAM27D1Q5T7N8 215 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 BTNL3Q6UXE8 466 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 C22orf15Q8WYQ4 148 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 EMG1Q92979 244 aaKnown RBP9.62□□□□□ -0.87
UBA3-211ENST00000493957 SDSLQ96GA7 329 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 MRI1Q9BV20 369 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 DNTTIP1Q9H147 329 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 NEK6Q9HC98 313 aa9.62□□□□□ -0.87
UBA3-211ENST00000493957 FBN1P35555 2871 aaKnown RBP9.62□□□□□ -0.87
UBA3-211ENST00000493957 TRAV40A0A0B4J280 105 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 MEX3AA1L020 520 aaKnown RBP9.61□□□□□ -0.87
UBA3-211ENST00000493957 DENRO43583 198 aaKnown RBP9.61□□□□□ -0.87
UBA3-211ENST00000493957 ALX3O95076 343 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 KNG1P01042 644 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 CD2P06729 351 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 MMP9P14780 707 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 NDUFB7P17568 137 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 PRKACAP17612 351 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 EPHA1P21709 976 aa9.61□□□□□ -0.87
UBA3-211ENST00000493957 EEF1B2P24534 225 aaKnown RBP9.61□□□□□ -0.87
UBA3-211ENST00000493957 OR3A4PP47883 348 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms