RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 GABRA6Q16445 453 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 HAGHQ16775 308 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 TSPO2Q5TGU0 170 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 FBXW9Q5XUX1 488 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 C11orf87Q6NUJ2 197 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 C1orf94Q6P1W5 598 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 SSX6Q7RTT6 188 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 PXKQ7Z7A4 578 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 DTX2Q86UW9 622 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 WDFY1Q8IWB7 410 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 ACBD7Q8N6N7 88 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 OR1J2Q8NGS2 313 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 PIGXQ8TBF5 258 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 TMEM234Q8WY98 164 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 RRNAD1Q96FB5 475 aaKnown RBP7.07□□□□□ -1.28
HDAC6-234ENST00000493923 S100A16Q96FQ6 103 aaKnown RBP7.07□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF385AQ96PM9 386 aaKnown RBP7.07□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF607Q96SK3 696 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 WFDC6Q9BQY6 131 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 SOX7Q9BT81 388 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 PRDM13Q9H4Q3 707 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 BEX1Q9HBH7 125 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 A4GALTQ9NPC4 353 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 SERINC1Q9NRX5 453 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 CISD1Q9NZ45 108 aaKnown RBP7.07□□□□□ -1.28
HDAC6-234ENST00000493923 B3GALT5Q9Y2C3 310 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 HDGFL3Q9Y3E1 203 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 TIMM10BQ9Y5J6 103 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 IGHV4-30-2A0A087WSY4 118 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 TRBV4-1A0A0J9YWV2 114 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 SHISA3A0PJX4 238 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 LIPT2A6NK58 231 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 F5H0A9 414 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 RNASEK-C17orf49H0YIS7 233 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 M0R1B8 84 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 LY6HO94772 140 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 SOX14O95416 240 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 LY86O95711 162 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 AGR2O95994 175 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 BCHEP06276 602 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 CALCBP10092 127 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 NR2F1P10589 423 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 CLUP10909 449 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 CD40P25942 277 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 OR1E2P47887 323 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 PRKXP51817 358 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 POLR2HP52434 150 aaKnown RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 ACTC1P68032 377 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 ACTA1P68133 377 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 CSNK2A1P68400 391 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 DLK1P80370 383 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 TIMM23BQ5SRD1 257 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 NHLRC1Q6VVB1 395 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 CEACAM19Q7Z692 300 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 TGIF2LXQ8IUE1 241 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF283Q8N7M2 679 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 PNLDC1Q8NA58 520 aaKnown RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 OR1J1Q8NGS3 322 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 BBS10Q8TAM1 723 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 SLC25A43Q8WUT9 341 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 SLC38A5Q8WUX1 472 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 MAFIPQ8WZ33 124 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 MAL2Q969L2 176 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 APH1AQ96BI3 265 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 TMEM19Q96HH6 336 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 SLC25A21Q9BQT8 299 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 ALG8Q9BVK2 526 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 C1orf198Q9H425 327 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 MTHFD2LQ9H903 347 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 FLVCR2Q9UPI3 526 aa7.06□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF443Q9Y2A4 671 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-234ENST00000493923 ANK2Q01484 3957 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 OR5H14A6NHG9 310 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 TRDCB7Z8K6 153 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF587BE7ETH6 402 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 RPL36A-HNRNPH2H7BZ11 118 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 J3KTA2 159 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 PPP1R2P9O14990 202 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 SIGLEC5O15389 551 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 MAGEB4O15481 346 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF208O43345 1280 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 NPIPB7O75200 414 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 FBXO24O75426 580 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 MED6O75586 246 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 FARS2O95363 451 aaKnown RBP7.05□□□□□ -1.28
HDAC6-234ENST00000493923 OPN1SWP03999 348 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 DBIP07108 87 aaKnown RBP7.05□□□□□ -1.28
HDAC6-234ENST00000493923 SFTA3P0C7M3 94 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 HLA-GP17693 338 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 ACHEP22303 614 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 DVL1P1P54792 670 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-234ENST00000493923 H2BFSP57053 126 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 TAS2R19P59542 299 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 EGR4Q05215 589 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 TNFRSF9Q07011 255 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 TSPAN31Q12999 210 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 KIAA0141Q14154 515 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-234ENST00000493923 OR7A5Q15622 319 aa7.05□□□□□ -1.28
HDAC6-234ENST00000493923 GFOD2Q3B7J2 385 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms