RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 F8VVB4 439 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 F8VWA3 439 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 F2RL2O00254 374 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 PRKYO43930 277 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 CHRM2P08172 466 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 VDAC2P45880 294 aaPredicted RBP13.96□□□□□ -0.17
COL9A1-210ENST00000493682 CRISP1P54107 249 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 CXCR4P61073 352 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 AQP12AQ8IXF9 295 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 OR8H2Q8N162 312 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 TRMT10AQ8TBZ6 339 aaKnown RBP13.96□□□□□ -0.17
COL9A1-210ENST00000493682 ZNF714Q96N38 554 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 DNAJB9Q9UBS3 223 aa13.96□□□□□ -0.17
COL9A1-210ENST00000493682 A0A1W2PRX2 142 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 ALDOBP05062 364 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 IGLL1P15814 213 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 HOXB6P17509 224 aaKnown RBP13.95□□□□□ -0.18
COL9A1-210ENST00000493682 ACTR3P61158 418 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 ACTA2P62736 377 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 ACTG2P63267 376 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 ACTC1P68032 377 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 ACTA1P68133 377 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 MEF2CQ06413 473 aaPredicted RBP13.95□□□□□ -0.18
COL9A1-210ENST00000493682 MINOS1Q5TGZ0 78 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 MEPCEQ7L2J0 689 aaKnown RBP13.95□□□□□ -0.18
COL9A1-210ENST00000493682 BCDIN3DQ7Z5W3 292 aaKnown RBP13.95□□□□□ -0.18
COL9A1-210ENST00000493682 SLC35F2Q8IXU6 374 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 WFDC9Q8NEX5 89 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 CEP19Q96LK0 163 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 OCSTAMPQ9BR26 566 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 THTPAQ9BU02 230 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 PAPOLBQ9NRJ5 636 aaKnown RBP13.95□□□□□ -0.18
COL9A1-210ENST00000493682 MTCH1Q9NZJ7 389 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 MRM2Q9UI43 246 aaKnown RBP13.95□□□□□ -0.18
COL9A1-210ENST00000493682 SNX5Q9Y5X3 404 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 MINOS1-NBL1R4GNA1 71 aa13.95□□□□□ -0.18
COL9A1-210ENST00000493682 TMEM82A0PJX8 343 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 FAM90A22PA8MWA6 464 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 CD33P20138 364 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 CCL1P22362 96 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 CBX1P83916 185 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 CD83Q01151 205 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 SLC34A1Q06495 639 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 EDDM3AQ14507 147 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 PTGES3Q15185 160 aaKnown RBP13.94□□□□□ -0.18
COL9A1-210ENST00000493682 OR5AU1Q8NGC0 362 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 SLAMF9Q96A28 289 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 SNX22Q96L94 193 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 MNTQ99583 582 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
COL9A1-210ENST00000493682 ADGRL4Q9HBW9 690 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 SLC7A11Q9UPY5 501 aa13.94□□□□□ -0.18
COL9A1-210ENST00000493682 IGKV1-27A0A075B6S5 117 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 IGHV2-26A0A0B4J1V2 119 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 hADV38S2A0JD32 116 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 ZNF670-ZNF695F2Z2N8 137 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 M0R129 80 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 FKBP6O75344 327 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 MPIG6BO95866 241 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 AZGP1P25311 298 aaKnown RBP13.93□□□□□ -0.18
COL9A1-210ENST00000493682 UBE2V2Q15819 145 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 ZNF676Q8N7Q3 588 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 NDNFQ8TB73 568 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 DNAJC9Q8WXX5 260 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 CLN6Q9NWW5 311 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 SESN1Q9Y6P5 492 aa13.93□□□□□ -0.18
COL9A1-210ENST00000493682 DNAJC8O75937 253 aaPredicted RBP13.92□□□□□ -0.18
COL9A1-210ENST00000493682 INMTO95050 263 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 IGHA1P01876 353 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 DAPP51397 102 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 ODF4Q2M2E3 257 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 AADACL4Q5VUY2 407 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 FAHD1Q6P587 224 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 SLC25A26Q70HW3 274 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 SPATA24Q86W54 205 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 EGFL6Q8IUX8 553 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 TPRX1Q8N7U7 411 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 CLEC7AQ9BXN2 247 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 TMEM133Q9H2Q1 129 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 LINC00312Q9Y6C7 94 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 DSCAML1Q8TD84 2053 aa13.92□□□□□ -0.18
COL9A1-210ENST00000493682 H3BSH0 61 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 H3BUI4 141 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 RPP14O95059 124 aaKnown RBP13.91□□□□□ -0.18
COL9A1-210ENST00000493682 HAND1O96004 215 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 PF4V1P10720 104 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 HTR1DP28221 377 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 FUT6P51993 359 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 EFNB1P98172 346 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 GRK1Q15835 563 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 TCTEX1D4Q5JR98 221 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 NXNL2Q5VZ03 156 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 SSX6Q7RTT6 188 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 TCEANCQ8N8B7 351 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 OR52N4Q8NGI2 321 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 NRBF2Q96F24 287 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 PRRG3Q9BZD7 231 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 CHST6Q9GZX3 395 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 PLEKHA1Q9HB21 404 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms