RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 LRP11Q86VZ4 500 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM217Q8N7C4 229 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 OR14L1PQ8NHC6 308 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 ADGRG7Q96K78 797 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 WFIKKN1Q96NZ8 548 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 EMC6Q9BV81 110 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 CALHM2Q9HA72 323 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 GPR84Q9NQS5 396 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 GNG13Q9P2W3 67 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 SHANK1Q9Y566 2161 aa10.24□□□□□ -0.77
HDAC4-210ENST00000493582 IGKV1-9A0A0C4DH69 117 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 A0A1B0GU03 582 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM225BP0DP42 221 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 FOLR1P15328 257 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 RAB4AP20338 218 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 OPRM1P35372 400 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 GNMTQ14749 295 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 TAF9Q16594 264 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 ABCA11PQ4W5N1 156 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 NCR3LG1Q68D85 454 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 NUP54Q7Z3B4 507 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 OR2C3Q8N628 320 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 NECAP1Q8NC96 275 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 OR10A7Q8NGE5 316 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 C11orf40Q8WZ69 217 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 OPN3Q9H1Y3 402 aaPredicted RBP10.23□□□□□ -0.77
HDAC4-210ENST00000493582 TCFL5Q9UL49 500 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 SEC16AO15027 2179 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 IGSF23A1L1A6 192 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 ZFP92A6NM28 416 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 CST7O76096 145 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 GCGP01275 180 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 CLPSP04118 112 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 EPHA1P21709 976 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 TUBG1P23258 451 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 GABRR1P24046 479 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 DUSP1P28562 367 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 SFTPDP35247 375 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 RPS21P63220 83 aaKnown RBP10.23□□□□□ -0.77
HDAC4-210ENST00000493582 BTNL3Q6UXE8 466 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 FAM89BQ8N5H3 189 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 OR11L1Q8NGX0 322 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 R3HDM4Q96D70 268 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 GAL3ST4Q96RP7 486 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 NAA60Q9H7X0 242 aa10.23□□□□□ -0.77
HDAC4-210ENST00000493582 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 TMED7-TICAM2A0A0A6YYA0 188 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 B4DEV8 164 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 IL33O95760 270 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 MT-ATP6P00846 226 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 RPL29P47914 159 aaKnown RBP10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ZFP36L1Q07352 338 aaKnown RBP10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF266Q14584 549 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 HERPUD1Q15011 391 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 MPV17LQ2QL34 196 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 FAM90A2PQ658T7 463 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 MEX3BQ6ZN04 569 aaKnown RBP10.22□□□□□ -0.77
HDAC4-210ENST00000493582 OR5C1Q8NGR4 320 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 VWCEQ96DN2 955 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 TPSD1Q9BZJ3 242 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF850A8MQ14 1090 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 TNFSF12O43508 249 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 CYB5R3P00387 301 aaPredicted RBP10.22□□□□□ -0.77
HDAC4-210ENST00000493582 TK1P04183 234 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 GP1BBP13224 206 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 CLN3Q13286 438 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 PMS2P11Q13670 270 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 RAB35Q15286 201 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF66Q6ZN08 573 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 MRPL41Q8IXM3 137 aaKnown RBP10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF248Q8NDW4 579 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 DTD1Q8TEA8 209 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 C17orf105B2RV13 164 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 GNRH1P01148 92 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF728P0DKX0 622 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF43P17038 809 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 ERVFC1-1P60608 527 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 PRSS8Q16651 343 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 SP5Q6BEB4 398 aaPredicted RBP10.22□□□□□ -0.77
HDAC4-210ENST00000493582 SLC16A14Q7RTX9 510 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 CMTM1Q8IZ96 169 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 FAM185AQ8N0U4 392 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 TMEM37Q8WXS4 190 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 OR8D2Q9GZM6 311 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 PLEKHJ1Q9NW61 149 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 MTCH2Q9Y6C9 303 aa10.22□□□□□ -0.77
HDAC4-210ENST00000493582 NPIPA5E9PKD4 350 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 MS4A18H0YCH9 400 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 MSTNO14793 375 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 FGF5P12034 268 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 POU3F1Q03052 451 aaPredicted RBP10.21□□□□□ -0.77
HDAC4-210ENST00000493582 KISS1Q15726 138 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 PRTGQ2VWP7 1150 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 MS4A18Q3C1V0 323 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 C1orf189Q5VU69 101 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 OR8B12Q8NGG6 310 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 LIN37Q96GY3 246 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms