RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 BARHL1Q9BZE3 327 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 LIN7BQ9HAP6 207 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 CCDC59Q9P031 241 aaKnown RBP11.29□□□□□ -0.6
MSH6-208ENST00000493177 RNF7Q9UBF6 113 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 CACNG2Q9Y698 323 aa11.29□□□□□ -0.6
MSH6-208ENST00000493177 IGHV4-61A0A0C4DH41 118 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 IGKV1-12A0A0C4DH73 117 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 CRTAPO75718 401 aaPredicted RBP11.28□□□□□ -0.6
MSH6-208ENST00000493177 NXPH2O95156 264 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 BPNT1O95861 308 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 IFNA2P01563 188 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 IGKV1D-12P01611 117 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 CSTBP04080 98 aaKnown RBP11.28□□□□□ -0.6
MSH6-208ENST00000493177 UBBP0CG47 229 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 CALCBP10092 127 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 CD37P11049 281 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
MSH6-208ENST00000493177 GLRA1P23415 457 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 COL8A2P25067 703 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
MSH6-208ENST00000493177 GPR6P46095 362 aaPredicted RBP11.28□□□□□ -0.6
MSH6-208ENST00000493177 C2orf76Q3KRA6 126 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 SAXO1Q8IYX7 474 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 C1orf87Q8N0U7 546 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 POC1AQ8NBT0 407 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 PXT1Q8NFP0 134 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 OR10Z1Q8NGY1 313 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 TBC1D15Q8TC07 691 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 Q8TCH9 128 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 EMG1Q92979 244 aaKnown RBP11.28□□□□□ -0.6
MSH6-208ENST00000493177 SLC25A28Q96A46 364 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 CEP19Q96LK0 163 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 BEX2Q9BXY8 128 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 SHARPINQ9H0F6 387 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 KCNK15Q9H427 330 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 NARFLQ9H6Q4 476 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 PCDHB16Q9NRJ7 776 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 TMEM106BQ9NUM4 274 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 MTCH1Q9NZJ7 389 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 HIVEP2P31629 2446 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 ABCA1O95477 2261 aa11.28□□□□□ -0.6
MSH6-208ENST00000493177 MAP1AP78559 2803 aaPredicted RBP11.27□□□□□ -0.6
MSH6-208ENST00000493177 IFNL4K9M1U5 179 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 PPIHO43447 177 aaKnown RBP11.27□□□□□ -0.61
MSH6-208ENST00000493177 ZNF780AO75290 641 aaPredicted RBP11.27□□□□□ -0.61
MSH6-208ENST00000493177 KDM4BO94953 1096 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 PAHP00439 452 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 TGFAP01135 160 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 PGA5P0DJD9 388 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 PRKACAP17612 351 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 HNF1AP20823 631 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 GIFP27352 417 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 CD80P33681 288 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 NPBWR2P48146 333 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 CAPZA1P52907 286 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 SNU13P55769 128 aaKnown RBP11.27□□□□□ -0.61
MSH6-208ENST00000493177 GPR176Q14439 515 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 CNPY1Q3B7I2 92 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 OR10K2Q6IF99 312 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 MZT2AQ6P582 158 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 LGALS14Q8TCE9 139 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 YIPF5Q969M3 257 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 FAM46BQ96A09 425 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 CST11Q9H112 138 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 RBFOX1Q9NWB1 397 aaKnown RBP11.27□□□□□ -0.61
MSH6-208ENST00000493177 ABRACLQ9P1F3 81 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 COMMD3Q9UBI1 195 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 LPAR3Q9UBY5 353 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
MSH6-208ENST00000493177 TMEM272A0A1B0GTI8 110 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 A0A1W2PP11 408 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 C3orf80F5H4A9 247 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 WNT9BO14905 357 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 TMEM127O75204 238 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 ZNF205O95201 554 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 MPIG6BO95866 241 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 SFTPBP07988 381 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 EGR1P18146 543 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 CFPP27918 469 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 BMXP51813 675 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 HOXA4Q00056 320 aaPredicted RBP11.26□□□□□ -0.61
MSH6-208ENST00000493177 ZNF181Q2M3W8 571 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 FIP1L1Q6UN15 594 aaKnown RBP11.26□□□□□ -0.61
MSH6-208ENST00000493177 ASCL4Q6XD76 172 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 Q8IYB0 196 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 FAM58AQ8N1B3 248 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 GCSAMQ8N6F7 178 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 C19orf18Q8NEA5 215 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 MCFD2Q8NI22 146 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 ACOT12Q8WYK0 555 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
MSH6-208ENST00000493177 GAL3ST1Q99999 423 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 NRIP2Q9BQI9 281 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 MRI1Q9BV20 369 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 C6orf62Q9GZU0 229 aaPredicted RBP11.26□□□□□ -0.61
MSH6-208ENST00000493177 BANF2Q9H503 90 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 DCAF16Q9NXF7 216 aa11.26□□□□□ -0.61
MSH6-208ENST00000493177 DNAJB11Q9UBS4 358 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms