RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 BATF2Q8N1L9 274 aa18.15■□□□□ 0.5
CCDC88B-208ENST00000492980 PRSS33Q8NF86 280 aa18.15■□□□□ 0.5
CCDC88B-208ENST00000492980 TNFSF18Q9UNG2 199 aa18.15■□□□□ 0.5
CCDC88B-208ENST00000492980 CD300LBA8K4G0 201 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 B3GALNT1O75752 331 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 WISP2O76076 250 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 ECI1P42126 302 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 ANKRD55Q3KP44 614 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 OR6K3Q8NGY3 331 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 GLRX2Q9NS18 164 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 RDH8Q9NYR8 311 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 PRR13Q9NZ81 148 aa18.14■□□□□ 0.5
CCDC88B-208ENST00000492980 TRAV17A0A0B4J275 112 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 C5orf51A6NDU8 294 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 TUBAL3A6NHL2 446 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 PGAM2P15259 253 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 BCL3P20749 454 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 HAAOP46952 286 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 RFPL4BQ6ZWI9 263 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 SAXO1Q8IYX7 474 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 COQ8AQ8NI60 647 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 SLAMF9Q96A28 289 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 POM121Q96HA1 1249 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 DOCK7Q96N67 2140 aa18.14■□□□□ 0.49
CCDC88B-208ENST00000492980 C13orf42A0A1B0GVH6 325 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM221AA4D161 298 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 OR5H8P0DN80 308 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 DEFB109BQ30KR1 87 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 TFAP2EQ6VUC0 442 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 SLC30A7Q8NEW0 376 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 LIME1Q9H400 295 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 RAB18Q9NP72 206 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 DECR2Q9NUI1 292 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 NECAP2Q9NVZ3 263 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 C14orf166Q9Y224 244 aaKnown RBP18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 A0A0D9SG52 128 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 ZNF732B4DXR9 585 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 FUT3P21217 361 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 ZNF345Q14585 488 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 ELP2Q6IA86 826 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 KCNRGQ8N5I3 272 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 NMES1Q9C002 83 aa18.13■□□□□ 0.49
CCDC88B-208ENST00000492980 OR7C1O76099 320 aaPredicted RBP18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 CRHP06850 196 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 PTGER4P35408 488 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 PMELP40967 661 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 TMEM200AQ86VY9 491 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 GCNT2Q8N0V5 402 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 BHLHE23Q8NDY6 225 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 OR5A2Q8NGI9 324 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 MARS2Q96GW9 593 aaKnown RBP18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 TRIB1Q96RU8 372 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 OR51B6Q9H340 312 aa18.12■□□□□ 0.49
CCDC88B-208ENST00000492980 RNF222A6NCQ9 220 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A10PA6NDY2 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A18PA6NE21 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A16PA6NEW6 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A20PA6NIJ5 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A8PA6NJQ4 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A7PA6NKC0 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A22PA8MWA6 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A12PA8MX19 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A5PA8MXJ8 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A23PA8MXZ1 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 AQP7O14520 342 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 LILRA1O75019 489 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 ADAP1O75689 374 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A15PP0C7V4 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A13PP0C7W8 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A14PP0C7W9 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM90A24PP0C7X0 464 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 IGHV1-2P23083 117 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 ATXN7L3Q14CW9 347 aaPredicted RBP18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 ALKAL2Q6UX46 152 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 Q6ZPA2 131 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 SLC51BQ86UW2 128 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 C12orf4Q9NQ89 552 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 KIF25Q9UIL4 384 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FAM186AA6NE01 2351 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 F8VVB4 439 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 F8VWA3 439 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 OR2F2O95006 317 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 KNG1P01042 644 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 CTSDP07339 412 aaPredicted RBP18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 CALCRP30988 508 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 FGF12P61328 243 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 OR2F1Q13607 317 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 GUSBP1Q15486 140 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 SLC22A25Q6T423 547 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 DHRS11Q6UWP2 260 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 COMMD7Q86VX2 200 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 OR5L1Q8NGL2 311 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 THAP6Q8TBB0 222 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 SCARB1Q8WTV0 552 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 OR5P3Q8WZ94 311 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 HS3ST6Q96QI5 342 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 ZNF442Q9H7R0 627 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 CHMP1AQ9HD42 196 aaPredicted RBP18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 MTCH1Q9NZJ7 389 aa18.11■□□□□ 0.49
CCDC88B-208ENST00000492980 MBD2Q9UBB5 411 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms