RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 HOXA4Q00056 320 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 FABP5Q01469 135 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 NEDD8Q15843 81 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 MICBQ29980 383 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 SMIM21Q3B7S5 101 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 STUMQ69YW2 141 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 SLC25A26Q70HW3 274 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 CEACAM19Q7Z692 300 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 CDH26Q8IXH8 852 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 Q8IYB0 196 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZSCAN4Q8NAM6 433 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 DEFB108BQ8NET1 73 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 NANPQ8TBE9 248 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 ORAI1Q96D31 301 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 TMEM246Q9BRR3 403 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 DNTTIP1Q9H147 329 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 RHOFQ9HBH0 211 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 A0A1W2PPK0 400 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 MAGEA13PA6NCF6 341 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 GABRPO00591 440 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 TNFRSF13BO14836 293 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 ARL6IP5O75915 188 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZNF205O95201 554 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 CYB5AP00167 134 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 SMIM18P0DKX4 95 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 JUNBP17275 347 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 GLRA1P23415 457 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 LCN2P80188 198 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 HSD17B12Q53GQ0 312 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 FAM27D1Q5T7N8 215 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 DDI2Q5TDH0 399 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 SFRP4Q6FHJ7 346 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 OR52N4Q8NGI2 321 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 TMIGD2Q96BF3 282 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 CEP19Q96LK0 163 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 JMJD8Q96S16 334 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 SUCNR1Q9BXA5 334 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 WDR13Q9H1Z4 485 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 PATZ1Q9HBE1 687 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 MTCH1Q9NZJ7 389 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 KAAG1Q9UBP8 84 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 POLR3KQ9Y2Y1 108 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-205ENST00000491825 TRDV1A0A1B0GX56 115 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 MEGF11A6BM72 1044 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 KDM4BO94953 1096 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZNF93P35789 620 aaPredicted RBP12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 POU3F4P49335 361 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 ATPAF1Q5TC12 328 aaPredicted RBP12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 ACP7Q6ZNF0 438 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 RNF144BQ7Z419 303 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 LYPD6Q86Y78 171 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 BOLLQ8N9W6 283 aaKnown RBP12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 C19orf18Q8NEA5 215 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 PXT1Q8NFP0 134 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 SLAMF9Q96A28 289 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 PPIL3Q9H2H8 161 aaKnown RBP12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 TCF7L1Q9HCS4 588 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 MMP26Q9NRE1 261 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 NLKQ9UBE8 527 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 DNAJB11Q9UBS4 358 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 TRRAPQ9Y4A5 3859 aa12.47□□□□□ -0.41
CDC42SE1-205ENST00000491825 IGKV1-12A0A0C4DH73 117 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 OR2AT4A6NND4 320 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 A8MXK9 166 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 FOXH1O75593 365 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 NXPH2O95156 264 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 PLATP00750 562 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 KNG1P01042 644 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 IGKV1D-12P01611 117 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 WNT2P09544 360 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 RPS2P15880 293 aaKnown RBP12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 SRMP19623 302 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 FGF9P31371 208 aaPredicted RBP12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 UBA52P62987 128 aaKnown RBP12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 NLRC3Q7RTR2 1065 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 LRRTM1Q86UE6 522 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 BPIFB2Q8N4F0 458 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 PNLDC1Q8NA58 520 aaKnown RBP12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 OR5D18Q8NGL1 313 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 ANGPTL6Q8NI99 470 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 C22orf15Q8WYQ4 148 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 GCDHQ92947 438 aaPredicted RBP12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 RFT1Q96AA3 541 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZNF488Q96MN9 340 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 GPER1Q99527 375 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 UQCC2Q9BRT2 126 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 SLITRK2Q9H156 845 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 SMURF1Q9HCE7 757 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZNF222Q9UK12 451 aa12.46□□□□□ -0.41
CDC42SE1-205ENST00000491825 STUB1Q9UNE7 303 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms