RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, human

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB1-208	ENST00000491360	LINC00346	Q8IVM7	164 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	SGPP2	Q8IWX5	399 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	MRPL43	Q8N983	215 aa	Known RBP	4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF248	Q8NDW4	579 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR13C9	Q8NGT0	318 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR2I1P	Q8NGU4	316 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR14C36	Q8NHC7	312 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	MFSD8	Q8NHS3	518 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	CCL4L1	Q8NHW4	92 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	RNF133	Q8WVZ7	376 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	ASB10	Q8WXI3	467 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	ERGIC1	Q969X5	290 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	SLAMF6	Q96DU3	332 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	ADAT3	Q96EY9	351 aa	Predicted RBP	4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	MARS2	Q96GW9	593 aa	Known RBP	4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	SLC46A1	Q96NT5	459 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	SSX3	Q99909	188 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	TMEM59	Q9BXS4	323 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	TGIF2	Q9GZN2	237 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	PBOV1	Q9GZY1	135 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	PRDM13	Q9H4Q3	707 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	CENPM	Q9NSP4	180 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	FAM206A	Q9NX38	181 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	NPIPA1	Q9UND3	350 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	FBXO7	Q9Y3I1	522 aa		4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
ABCB1-208	ENST00000491360		A0A087X0M5	115 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360		A0A1B0GX30	115 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	LINC01553	A4QN01	128 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TLCD2	A6NGC4	264 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	NPIPB13	A6NJU9	1138 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF726	A6NNF4	738 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	NPIPB4	C9JG80	1138 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF878	C9JN71	531 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	MKRN2OS	H3BPM6	223 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360		H3BQ15	152 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	SDCBP	O00560	298 aa	Predicted RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	SLC31A1	O15431	190 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	HCRTR1	O43613	425 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	HCRTR2	O43614	444 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	NPIPB7	O75200	414 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	CRTAP	O75718	401 aa	Predicted RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	RAD51D	O75771	328 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	NSA2	O95478	260 aa	Known RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	NUDT14	O95848	222 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	HCK	P08631	526 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	CD63	P08962	238 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	LINC00271	P0C7V0	271 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	SERPINA2	P20848	420 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	BCKDHB	P21953	392 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	IL12B	P29460	328 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	PPP1CC	P36873	323 aa	Known RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TAGLN2	P37802	199 aa	Known RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR3A4P	P47883	348 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	DAP3	P51398	398 aa	Known RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TMEM50B	P56557	158 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	HSD17B7	P56937	341 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	UBE2K	P61086	200 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	DCAF7	P61962	342 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	ELOB	Q15370	118 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	UBE2V2	Q15819	145 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	FAM78A	Q5JUQ0	283 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TCEAL6	Q6IPX3	200 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	SLC22A25	Q6T423	547 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR5AS1	Q8N127	324 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	HIST3H2BB	Q8N257	126 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TMEM156	Q8N614	296 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR51T1	Q8NGJ9	327 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	OR5R1	Q8NH85	324 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	FAM213B	Q8TBF2	198 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	M1AP	Q8TC57	530 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	STT3B	Q8TCJ2	826 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	HPSE2	Q8WWQ2	592 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TSACC	Q96A04	125 aa	Predicted RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	MRPL24	Q96A35	216 aa	Known RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	FAM131C	Q96AQ9	280 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	ZNF524	Q96C55	264 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	NTNG2	Q96CW9	530 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	RAB39B	Q96DA2	213 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TVP23C	Q96ET8	276 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	ARHGAP5-AS1	Q96IT6	56 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	C1orf147	Q96MC9	270 aa	Predicted RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	GPER1	Q99527	375 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	C2orf88	Q9BSF0	95 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	ST6GALNAC5	Q9BVH7	336 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	PECR	Q9BY49	303 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	PARP12	Q9H0J9	701 aa	Known RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	NXF5	Q9H1B4	397 aa	Known RBP	4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	BANF2	Q9H503	90 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	PTGES2	Q9H7Z7	377 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	WFDC1	Q9HC57	220 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	HRASLS2	Q9NWW9	162 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	DCAF16	Q9NXF7	216 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	OBP2A	Q9NY56	170 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	TBX21	Q9UL17	535 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	CLDN16	Q9Y5I7	305 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	MMP24	Q9Y5R2	645 aa		4.19	□□□□□ -1.74
ABCB1-208	ENST00000491360	CHD3	Q12873	2000 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms