RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GMNCA6NCL1 334 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 IGLL5B9A064 214 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 ZNF593O00488 134 aaPredicted RBP1.84□□□□□ -2.11
CD46-216ENST00000490278 DHRS3O75911 302 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 LIPCP11150 499 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 HTR2CP28335 458 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 P2RY2P41231 377 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 HTR2BP41595 481 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 SLC18A1P54219 525 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 DYNC1I2Q13409 638 aaKnown RBP1.84□□□□□ -2.11
CD46-216ENST00000490278 HNRNPA1L2Q32P51 320 aaKnown RBP1.84□□□□□ -2.11
CD46-216ENST00000490278 LDLRAD2Q5SZI1 272 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 OR13C9Q8NGT0 318 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 MITD1Q8WV92 249 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 MAP1LC3CQ9BXW4 147 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 SHCBP1LQ9BZQ2 653 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 TM6SF2Q9BZW4 377 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 PORCNQ9H237 461 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 SLC38A1Q9H2H9 487 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 DUSP21Q9H596 190 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 ANKHQ9HCJ1 492 aa1.84□□□□□ -2.11
CD46-216ENST00000490278 GSTTP1A0A1W2PQM5 241 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 TVP23AA6NH52 213 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 PRMT5O14744 637 aaPredicted RBP1.83□□□□□ -2.12
CD46-216ENST00000490278 RGS5O15539 181 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 GPR4P46093 362 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ATP6AP1LQ52LC2 224 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 CLLU1OSQ5K130 101 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 LIN9Q5TKA1 542 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ZNF660Q6AZW8 331 aaPredicted RBP1.83□□□□□ -2.12
CD46-216ENST00000490278 AMMECR1LQ6DCA0 310 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 UGT2A3Q6UWM9 527 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 PAGE2Q7Z2X7 111 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 TMEM144Q7Z5S9 345 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 LRP11Q86VZ4 500 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 OR8A1Q8NGG7 326 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 OR6N2Q8NGY6 317 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 UBA3Q8TBC4 463 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 TNFRSF14Q92956 283 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 QKIQ96PU8 341 aaKnown RBP eCLIP1.83□□□□□ -2.12
CD46-216ENST00000490278 UTP23Q9BRU9 249 aaKnown RBP1.83□□□□□ -2.12
CD46-216ENST00000490278 TSGA10Q9BZW7 698 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 SRRQ9GZT4 340 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 PRORYQ9H606 182 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ASB7Q9H672 318 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 C12orf4Q9NQ89 552 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ASF1BQ9NVP2 202 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 TAC3Q9UHF0 121 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ANXA10Q9UJ72 324 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ACOT9Q9Y305 439 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ZNF780BQ9Y6R6 833 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 ZBED9Q6R2W3 1325 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 LTBP4Q8N2S1 1624 aa1.83□□□□□ -2.12
CD46-216ENST00000490278 SETD1AO15047 1707 aaKnown RBP1.83□□□□□ -2.12
CD46-216ENST00000490278 LOC389332A0A1B0GUA5 103 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 SLC5A10A0PJK1 596 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 C15orf65H3BRN8 121 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 RFXANKO14593 260 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 RLN2P04090 185 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 LGALS3P17931 250 aaKnown RBP1.82□□□□□ -2.12
CD46-216ENST00000490278 TAC1P20366 129 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 PTNP21246 168 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 KLF3P57682 345 aaPredicted RBP1.82□□□□□ -2.12
CD46-216ENST00000490278 SSX1Q16384 188 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 ZNF404Q494X3 552 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 SLC25A25Q6KCM7 469 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 CLEC18BQ6UXF7 455 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 FAM58AQ8N1B3 248 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 ASCC1Q8N9N2 400 aaKnown RBP1.82□□□□□ -2.12
CD46-216ENST00000490278 CMTM2Q8TAZ6 248 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 C22orf15Q8WYQ4 148 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 ABCG5Q9H222 651 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 VCX3AQ9NNX9 186 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 SDHAF3Q9NRP4 125 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 ZNF586Q9NXT0 402 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 BZW2Q9Y6E2 419 aaKnown RBP1.82□□□□□ -2.12
CD46-216ENST00000490278 HIVEP2P31629 2446 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 SDK2Q58EX2 2172 aa1.82□□□□□ -2.12
CD46-216ENST00000490278 BAZ1BQ9UIG0 1483 aaKnown RBP1.82□□□□□ -2.12
CD46-216ENST00000490278 IGKV1OR2-108A0A075B7D4 117 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 OR2AT4A6NND4 320 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 D6RAR5 112 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 H3BQ85 93 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 K7EN84 100 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 K7EPK0 472 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 UPK2O00526 184 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 SLC37A4O43826 429 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 COX7A2P2O60397 106 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 ENTPD6O75354 484 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 CSTAP01040 98 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 PTHLHP12272 177 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 IMPA1P29218 277 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 ENDOGQ14249 297 aaKnown RBP1.81□□□□□ -2.12
CD46-216ENST00000490278 SLC9A3R2Q15599 337 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 PYDC2Q56P42 97 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 PDZD11Q5EBL8 140 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 CLEC12AQ5QGZ9 265 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 C6orf183Q5T699 404 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 ZNF470Q6ECI4 717 aa1.81□□□□□ -2.12
CD46-216ENST00000490278 HCP5Q6MZN7 132 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms