RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 STAB2Q8WWQ8 2551 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 DNAH1Q9P2D7 4330 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 A6NIN4 97 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 PRR32B1ATL7 298 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 F8VVB4 439 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 F8VWA3 439 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 H0YHG0 523 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 DLGAP1O14490 977 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 PRODHO43272 600 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 MMP23AO75900 390 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 OR2F2O95006 317 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 BRS3P32247 399 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 RPS7P62081 194 aaKnown RBP11.09□□□□□ -0.63
VARS-227ENST00000489979 RPL23AP62750 156 aaKnown RBP11.09□□□□□ -0.63
VARS-227ENST00000489979 DGCR2P98153 550 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 MFGE8Q08431 387 aaPredicted RBP11.09□□□□□ -0.63
VARS-227ENST00000489979 KCTD18Q6PI47 426 aaPredicted RBP11.09□□□□□ -0.63
VARS-227ENST00000489979 DEGS2Q6QHC5 323 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 CD300LDQ6UXZ3 194 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 ZBTB49Q6ZSB9 765 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 C18orf65Q6ZTR6 163 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 CPOQ8IVL8 374 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 TFAP2CQ92754 450 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 SNX22Q96L94 193 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 MROQ9BYG7 248 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 PKIBQ9C010 78 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 REEP1Q9H902 201 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 NUFIP1Q9UHK0 495 aaKnown RBP11.09□□□□□ -0.63
VARS-227ENST00000489979 PCDHGB5Q9Y5G0 923 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 LINC00312Q9Y6C7 94 aa11.09□□□□□ -0.63
VARS-227ENST00000489979 TENM2Q9NT68 2774 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 PSMB11A5LHX3 300 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 TTRP02766 147 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 ATP6V1B2P21281 511 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 CBX1P83916 185 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 IL24Q13007 206 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 GINS1Q14691 196 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 ZNF829Q3KNS6 432 aaPredicted RBP11.08□□□□□ -0.64
VARS-227ENST00000489979 SLC35D3Q5M8T2 416 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 NKAPLQ5M9Q1 402 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 OR2T5Q6IEZ7 315 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 BAIAP2L2Q6UXY1 529 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 C8orf86Q6ZUL3 223 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 OR2T29Q8NH02 315 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 TRMT10AQ8TBZ6 339 aaKnown RBP11.08□□□□□ -0.64
VARS-227ENST00000489979 FEVQ99581 238 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 TTTY10Q9BZA0 68 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 YIPF3Q9GZM5 350 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 CHST6Q9GZX3 395 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 MTCH1Q9NZJ7 389 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 DNAJB9Q9UBS3 223 aa11.08□□□□□ -0.64
VARS-227ENST00000489979 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
VARS-227ENST00000489979 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.08□□□□□ -0.64
VARS-227ENST00000489979 INMTO95050 263 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 MRPL3P09001 348 aaKnown RBP11.07□□□□□ -0.64
VARS-227ENST00000489979 SLC2A5P22732 501 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 MYCNOSP40205 109 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 ARHGDIBP52566 201 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 RIDAP52758 137 aaKnown RBP11.07□□□□□ -0.64
VARS-227ENST00000489979 GRK1Q15835 563 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 HSP90B2PQ58FF3 399 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 OR2W3Q7Z3T1 314 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 ZNF679Q8IYX0 411 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 ABHD12Q8N2K0 398 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 OR52N4Q8NGI2 321 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 OR14K1Q8NGZ2 314 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 CEP19Q96LK0 163 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 ASCL2Q99929 193 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 PAPOLBQ9NRJ5 636 aaKnown RBP11.07□□□□□ -0.64
VARS-227ENST00000489979 HHLA2Q9UM44 414 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 GTF2A1LQ9UNN4 478 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 COPS3Q9UNS2 423 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
VARS-227ENST00000489979 V9GYS6 101 aa11.07□□□□□ -0.64
VARS-227ENST00000489979 FAM230AA0A1W2PPH8 454 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 TCRBV5S2A0A599 114 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 FAM172BPA6NC97 362 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 NUDT19A8MXV4 375 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 LEUTXA8MZ59 168 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 RAMP3O60896 148 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 ZNF254O75437 659 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 IGHA1P01876 353 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 HMGN1P05114 100 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 GABRR1P24046 479 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 PEX2P28328 305 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 BDH1Q02338 343 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 ROM1Q03395 351 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 APOFQ13790 326 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 SNAPC1Q16533 368 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 KLHL22Q53GT1 634 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 PRAMEF5Q5TYX0 476 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 TRAPPC6BQ86SZ2 158 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 ZNF596Q8TC21 504 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 SLAMF9Q96A28 289 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 P2RX4Q99571 388 aa11.06□□□□□ -0.64
VARS-227ENST00000489979 ELAC2Q9BQ52 826 aaKnown RBP11.06□□□□□ -0.64
VARS-227ENST00000489979 CADM1Q9BY67 442 aaKnown RBP11.06□□□□□ -0.64
VARS-227ENST00000489979 MAGIXQ9H6Y5 334 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms