RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 SPENQ96T58 3664 aaKnown RBP13.62□□□□□ -0.23
BRD9-208ENST00000489816 MGAQ8IWI9 3026 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 A0A1B0GW55 424 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 F8VVB4 439 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 F8VWA3 439 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 JMJD7P0C870 316 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DUX4L2P0CJ85 424 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DUX4L3P0CJ86 424 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DUX4L4P0CJ87 422 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DUX4L5P0CJ88 424 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DUX4L6P0CJ89 424 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DUX4L7P0CJ90 424 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 ABCA11PQ4W5N1 156 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 PDSS1Q5T2R2 415 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 GGNBP1Q5YKI7 109 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 SUMF1Q8NBK3 374 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 LHFPL5Q8TAF8 219 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 NKX6-2Q9C056 277 aaPredicted RBP13.62□□□□□ -0.23
BRD9-208ENST00000489816 PRO3102Q9H379 93 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DUX4Q9UBX2 424 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 DNASE2O00115 360 aaPredicted RBP13.62□□□□□ -0.23
BRD9-208ENST00000489816 FKBP2P26885 142 aaKnown RBP13.62□□□□□ -0.23
BRD9-208ENST00000489816 SRD5A2P31213 254 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 FAM3AP98173 230 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 RAB35Q15286 201 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 RAB11FIP2Q7L804 512 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 OR4A4PQ8NGN8 299 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 FNDC9Q8TBE3 224 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 SGCZQ96LD1 299 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 OR2H1Q9GZK4 316 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 ARRDC1-AS1Q9H2J1 176 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.62□□□□□ -0.232e-8■■■■■ 32.5
BRD9-208ENST00000489816 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
BRD9-208ENST00000489816 RIF1Q5UIP0 2472 aaKnown RBP13.61□□□□□ -0.23
BRD9-208ENST00000489816 PCNX2A6NKB5 2137 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 ZNF708P17019 499 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 AKR1C3P42330 323 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 CBX5P45973 191 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 IGSF11Q5DX21 431 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 POC1AQ8NBT0 407 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 OR2V1Q8NHB1 315 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 SCGB3A2Q96PL1 93 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 MED6O75586 246 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 CER1O95813 267 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 HIST1H3AP68431 136 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 HIST2H3PS2Q5TEC6 136 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 HIST2H3AQ71DI3 136 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 C1orf210Q8IVY1 113 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 PARPBPQ9NWS1 579 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 ANAPC10Q9UM13 185 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 TMEM218A2RU14 115 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 FCGR3AP08637 254 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 CD79AP11912 226 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 EDN3P14138 238 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 DUSP3P51452 185 aaPredicted RBP13.61□□□□□ -0.23
BRD9-208ENST00000489816 TUSC5Q8IXB3 177 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 RNF141Q8WVD5 230 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 RTN4IP1Q8WWV3 396 aaPredicted RBP13.61□□□□□ -0.23
BRD9-208ENST00000489816 NUDT16L1Q9BRJ7 211 aaKnown RBP13.61□□□□□ -0.23
BRD9-208ENST00000489816 TAF9BQ9HBM6 251 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 GPR35Q9HC97 309 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 NOSIPQ9Y314 301 aaKnown RBP13.61□□□□□ -0.23
BRD9-208ENST00000489816 RFNGQ9Y644 331 aa13.61□□□□□ -0.23
BRD9-208ENST00000489816 DCHS1Q96JQ0 3298 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 C5orf49A4QMS7 147 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 GJE1A6NN92 205 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 BET1O15155 118 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 MRPL33O75394 65 aaKnown RBP13.6□□□□□ -0.23
BRD9-208ENST00000489816 NFYBP25208 207 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 FHITP49789 147 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 Q6ZPA2 131 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 NEK7Q8TDX7 302 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 ERGIC1Q969X5 290 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 GUCD1Q96NT3 240 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 TM2D1Q9BX74 207 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 PIGMQ9H3S5 423 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 TIMM10BQ9Y5J6 103 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 K7EPK0 472 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 TSPAN9O75954 239 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 C1QL1O75973 258 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 NGFP01138 241 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 ZNF728P0DKX0 622 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 RPL12P30050 165 aaKnown RBP13.6□□□□□ -0.23
BRD9-208ENST00000489816 LPAR6P43657 344 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 ARF1P84077 181 aaKnown RBP13.6□□□□□ -0.23
BRD9-208ENST00000489816 OSR2Q8N2R0 312 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 FAM71E2Q8N5Q1 922 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 ZNF611Q8N823 705 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 PSMF1Q92530 271 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 ZNF488Q96MN9 340 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 FOXJ2Q9P0K8 574 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 GHRLQ9UBU3 117 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 GTF3C1Q12789 2109 aa13.6□□□□□ -0.23
BRD9-208ENST00000489816 ZNF503-AS2A6NEH8 195 aa13.59□□□□□ -0.23
BRD9-208ENST00000489816 HKR1P10072 659 aa13.59□□□□□ -0.23
BRD9-208ENST00000489816 ITGA3P26006 1051 aa13.59□□□□□ -0.23
BRD9-208ENST00000489816 MAGEA5P43359 124 aa13.59□□□□□ -0.23
BRD9-208ENST00000489816 GPM6AP51674 278 aa13.59□□□□□ -0.23
BRD9-208ENST00000489816 H3F3CQ6NXT2 135 aa13.59□□□□□ -0.23
BRD9-208ENST00000489816 C6orf15Q6UXA7 325 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms