RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 RFT1Q96AA3 541 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 NKX3-1Q99801 234 aaPredicted RBP6.54□□□□□ -1.36
SSR1-210ENST00000489567 MND1Q9BWT6 205 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 CCDC90BQ9GZT6 254 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 ZCCHC4Q9H5U6 513 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 TAS2R4Q9NYW5 299 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 MTCH1Q9NZJ7 389 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 MIOXQ9UGB7 285 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 SCOCQ9UIL1 159 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 KCNS2Q9ULS6 477 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 SLC7A11Q9UPY5 501 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 CUBNO60494 3623 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.54□□□□□ -1.362e-8■■□□□ 12.6
SSR1-210ENST00000489567 TRBV5-5A0A0J9YX44 114 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ADAM20O43506 726 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 SERPINA3P01011 423 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 AVPP01185 164 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 OCM2P0CE71 109 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 PGA5P0DJD9 388 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 MUC1P15941 1255 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 GLRA1P23415 457 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 PITPNBP48739 271 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 RBP2P50120 134 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ERVK11-1P61568 191 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 PAX2Q02962 417 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ACSM1Q08AH1 577 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 CNN3Q15417 329 aaKnown RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 SPHARQ15513 63 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 MED22Q15528 200 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 MICBQ29980 383 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 CR1LQ2VPA4 569 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 STUMQ69YW2 141 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ZNF529Q6P280 563 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 C1orf229Q6ZS94 237 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 SERPINA12Q8IW75 414 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 FAM216BQ8N7L0 139 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 POC1AQ8NBT0 407 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 DNAAF1Q8NEP3 725 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ZNF671Q8TAW3 534 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 TMEM106AQ96A25 262 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 BORCS8Q96FH0 119 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 NEIL1Q96FI4 390 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 TECTBQ96PL2 329 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 CCL13Q99616 98 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 NRIP2Q9BQI9 281 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 PKIBQ9C010 78 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 NEK6Q9HC98 313 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 HIVEP2P31629 2446 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 SONP18583 2426 aaKnown RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 IGKV1D-17A0A075B6S4 117 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 TRAV8-7A0A075B6U6 113 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 TRAV20A0A0B4J274 112 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 IGKV1-12A0A0C4DH73 117 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 A0A1W2PPK0 400 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ANKRD34BA5PLL1 514 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 MAGEA13PA6NCF6 341 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 A8MXK9 166 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 SPRY1O43609 319 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 NOS1APO75052 506 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 IGKV1D-12P01611 117 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 PSG2P11465 335 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 EEF1B2P24534 225 aaKnown RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 NPBWR2P48146 333 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 POU3F4P49335 361 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 CEBPDP49716 269 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 MTCP1P56278 107 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 TAS2R43P59537 309 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 GNB2P62879 340 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 IL24Q13007 206 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ESCO2Q56NI9 601 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 YIF1BQ5BJH7 314 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 FAM120AOSQ5T036 256 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 WDR25Q64LD2 544 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 ACP7Q6ZNF0 438 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 SLC25A26Q70HW3 274 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 AKAP14Q86UN6 197 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 GLCCI1Q86VQ1 547 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 CLVS1Q8IUQ0 354 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 OR8B3Q8NGG8 313 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 OR5D18Q8NGL1 313 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 OR5D14Q8NGL3 314 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 SLAMF9Q96A28 289 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 DACT3Q96B18 629 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 SPSB1Q96BD6 273 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 TMIGD2Q96BF3 282 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 OPALINQ96PE5 141 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 OR14A2Q96R54 314 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 OR8B2Q96RD0 313 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 Q9H521 79 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 HES4Q9HCC6 221 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 NLKQ9UBE8 527 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 IL36RNQ9UBH0 155 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 DNAJB11Q9UBS4 358 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 ZNF222Q9UK12 451 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 LRCH1Q9Y2L9 728 aa6.53□□□□□ -1.36
SSR1-210ENST00000489567 POLR3KQ9Y2Y1 108 aaPredicted RBP6.53□□□□□ -1.36
SSR1-210ENST00000489567 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.36
SSR1-210ENST00000489567 TRBV5-7A0A0A0MS05 114 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms