RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 BATF2Q8N1L9 274 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 TMEM185AQ8NFB2 350 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 H1FXQ92522 213 aaKnown RBP14.33□□□□□ -0.11
MDC1-206ENST00000489540 RGP1Q92546 391 aaPredicted RBP14.33□□□□□ -0.11
MDC1-206ENST00000489540 CDCA4Q9BXL8 241 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 SEBOXQ9HB31 216 aaPredicted RBP14.33□□□□□ -0.11
MDC1-206ENST00000489540 KPTNQ9Y664 436 aa14.33□□□□□ -0.11
MDC1-206ENST00000489540 INMTO95050 263 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 CD1AP06126 327 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 CHRM2P08172 466 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 HCKP08631 526 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 MMP9P14780 707 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 CAPZA1P52907 286 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 PDCD1Q15116 288 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 YIF1BQ5BJH7 314 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 ZNF529Q6P280 563 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 FIP1L1Q6UN15 594 aaKnown RBP14.32□□□□□ -0.12
MDC1-206ENST00000489540 SAXO1Q8IYX7 474 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 CMTM4Q8IZR5 234 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 CPNE2Q96FN4 548 aaPredicted RBP14.32□□□□□ -0.12
MDC1-206ENST00000489540 JMJD8Q96S16 334 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 MDFIQ99750 246 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 PCGF1Q9BSM1 259 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 MS4A7Q9GZW8 240 aaPredicted RBP14.32□□□□□ -0.12
MDC1-206ENST00000489540 FAM234AQ9H0X4 552 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 RHOFQ9HBH0 211 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 ZNF69Q9UC07 566 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 OR14J1Q9UGF5 321 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 TRBV23-1A0A0A0MS06 115 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 RNF212BA8MTL3 300 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 F8VVB4 439 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 F8VWA3 439 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 VHLP40337 213 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 BDH1Q02338 343 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 KISS1Q15726 138 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 GPR157Q5UAW9 335 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 FAM58AQ8N1B3 248 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 KIR3DL3Q8N743 410 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 ZSCAN4Q8NAM6 433 aaPredicted RBP14.32□□□□□ -0.12
MDC1-206ENST00000489540 EMG1Q92979 244 aaKnown RBP14.32□□□□□ -0.12
MDC1-206ENST00000489540 TMEM106AQ96A25 262 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 SLC6A7Q99884 636 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 MND1Q9BWT6 205 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 SIRPDQ9H106 197 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 RAB26Q9ULW5 256 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 ATRQ13535 2644 aa14.32□□□□□ -0.12
MDC1-206ENST00000489540 TRBV5-5A0A0J9YX44 114 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 SPRY1O43609 319 aaPredicted RBP14.31□□□□□ -0.12
MDC1-206ENST00000489540 SFTPBP07988 381 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 IGHV4-38-2P0DP08 117 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 NPBWR2P48146 333 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 SLC35A2P78381 396 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 Q499Y3 187 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 RBMS3Q6XE24 437 aaKnown RBP14.31□□□□□ -0.12
MDC1-206ENST00000489540 C1orf122Q6ZSJ8 110 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 C9orf139Q6ZV77 190 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 ZFP41Q8N8Y5 198 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 TBC1D15Q8TC07 691 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 C22orf15Q8WYQ4 148 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 RFT1Q96AA3 541 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 PGLYRP3Q96LB9 341 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 SPACA5Q96QH8 159 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 TBX15Q96SF7 602 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 DUSP21Q9H596 190 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 ONECUT1Q9UBC0 465 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 GLS2Q9UI32 602 aa14.31□□□□□ -0.12
MDC1-206ENST00000489540 IGHV3OR16-10A0A075B7F0 116 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 TRAV40A0A0B4J280 105 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 A0A1W2PQ09 198 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 KDM4BO94953 1096 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 TK1P04183 234 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 ALDOBP05062 364 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 TMEM225BP0DP42 221 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 CELP19835 753 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 BCL3P20749 454 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 CEBPDP49716 269 aaPredicted RBP14.3□□□□□ -0.12
MDC1-206ENST00000489540 HILS1P60008 231 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 PPP3R1P63098 170 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 ACSM1Q08AH1 577 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 ZNF146Q15072 292 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 TUSC1Q2TAM9 212 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 HMG20AQ9NP66 347 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 TMEM138Q9NPI0 162 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 RBFOX1Q9NWB1 397 aaKnown RBP14.3□□□□□ -0.12
MDC1-206ENST00000489540 TAS2R4Q9NYW5 299 aa14.3□□□□□ -0.12
MDC1-206ENST00000489540 DOCK11Q5JSL3 2073 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 K7N7A8 449 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 M0R1W7 72 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 ANGPTL7O43827 346 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 VENTXO95231 258 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 PRKACAP17612 351 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 RPS11P62280 158 aaKnown RBP eCLIP14.29□□□□□ -0.12
MDC1-206ENST00000489540 COL10A1Q03692 680 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 BLMHQ13867 455 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 SPHARQ15513 63 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 SPIN3Q5JUX0 258 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 BCL6BQ8N143 479 aaPredicted RBP14.29□□□□□ -0.12
MDC1-206ENST00000489540 OR5D18Q8NGL1 313 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 OR5D13Q8NGL4 314 aa14.29□□□□□ -0.12
MDC1-206ENST00000489540 ZFAND2BQ8WV99 257 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms