RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 GEMIN2O14893 280 aaKnown RBP8.5□□□□□ -1.05
USP11-211ENST00000489111 TPD52L2O43399 206 aaKnown RBP8.5□□□□□ -1.05
USP11-211ENST00000489111 LANCL1O43813 399 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 ORC5O43913 435 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 PDCD6O75340 191 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 RHBDL1O75783 438 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 OR7C1O76099 320 aaPredicted RBP8.5□□□□□ -1.05
USP11-211ENST00000489111 CSF1P09603 554 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 FAM90A15PP0C7V4 464 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 FAM90A13PP0C7W8 464 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 FAM90A14PP0C7W9 464 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 FAM90A24PP0C7X0 464 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 PGA5P0DJD9 388 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 APOBEC3AP31941 199 aaPredicted RBP8.5□□□□□ -1.05
USP11-211ENST00000489111 RCVRNP35243 200 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 GMFBP60983 142 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 GUCA2AQ02747 115 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 SSBP1Q04837 148 aaKnown RBP8.5□□□□□ -1.05
USP11-211ENST00000489111 MAB21L1Q13394 359 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 IKZF1Q13422 519 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 PNLIPRP3Q17RR3 467 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 ZNF260Q3ZCT1 412 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 ZNF672Q499Z4 452 aaPredicted RBP8.5□□□□□ -1.05
USP11-211ENST00000489111 NHLRC3Q5JS37 347 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 LINC00596Q86U02 117 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 CELF2-AS1Q8N7Q2 184 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 POC1AQ8NBT0 407 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 Q8NFD4 153 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 ENKURQ8TC29 256 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 GPX8Q8TED1 209 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 CHPT1Q8WUD6 406 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 NUDCD2Q8WVJ2 157 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 NEUROG1Q92886 237 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 MEGF10Q96KG7 1140 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 OR2V2Q96R30 315 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 DHRS9Q9BPW9 319 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 NRIP2Q9BQI9 281 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 PECRQ9BY49 303 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 TLNRD1Q9H1K6 362 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 SPACA1Q9HBV2 294 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 C1orf123Q9NWV4 160 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 MTFP1Q9UDX5 166 aa8.5□□□□□ -1.05
USP11-211ENST00000489111 ZFYVE26Q68DK2 2539 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 MEIS3P1A6NDR6 274 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 B9A039 149 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 F8VVB4 439 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 F8VWA3 439 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 SIAH2O43255 324 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 LYRM1O43325 122 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 IGHV1-46P01743 117 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 MELTFP08582 738 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 FUT3P21217 361 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 CHATP28329 748 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 FAUP35544 74 aaKnown RBP8.49□□□□□ -1.05
USP11-211ENST00000489111 CBX5P45973 191 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 SNRPD2P62316 118 aaKnown RBP8.49□□□□□ -1.05
USP11-211ENST00000489111 DYRK1AQ13627 763 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 IL13RA2Q14627 380 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 EFNB3Q15768 340 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 MPV17LQ2QL34 196 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 SMIM21Q3B7S5 101 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 PCGF3Q3KNV8 242 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 PLAC9Q5JTB6 97 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 ATAD3CQ5T2N8 411 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 CENPSQ8N2Z9 138 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 OR11L1Q8NGX0 322 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 NEK7Q8TDX7 302 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 ITLN1Q8WWA0 313 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 SEH1LQ96EE3 360 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 HS3ST6Q96QI5 342 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 C7orf50Q9BRJ6 194 aaKnown RBP8.49□□□□□ -1.05
USP11-211ENST00000489111 TMEM204Q9BSN7 226 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 EGLN1Q9GZT9 426 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 C11orf54Q9H0W9 315 aaPredicted RBP8.49□□□□□ -1.05
USP11-211ENST00000489111 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.49□□□□□ -1.05
USP11-211ENST00000489111 CISD1Q9NZ45 108 aaKnown RBP8.49□□□□□ -1.05
USP11-211ENST00000489111 KLK11Q9UBX7 282 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 IL19Q9UHD0 177 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 GLS2Q9UI32 602 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 HSF4Q9ULV5 492 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 RBMX2Q9Y388 322 aaKnown RBP8.49□□□□□ -1.05
USP11-211ENST00000489111 CACNG2Q9Y698 323 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 COL6A6A6NMZ7 2263 aa8.49□□□□□ -1.05
USP11-211ENST00000489111 WIPF3A6NGB9 483 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 FOXI3A8MTJ6 420 aaPredicted RBP8.48□□□□□ -1.05
USP11-211ENST00000489111 C17orf100A8MU93 164 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 NOS1APO75052 506 aaPredicted RBP8.48□□□□□ -1.05
USP11-211ENST00000489111 CA11O75493 328 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 PTBP3O95758 552 aaKnown RBP8.48□□□□□ -1.05
USP11-211ENST00000489111 PLAUP00749 431 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 ADH4P08319 380 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 ACAA1P09110 424 aaPredicted RBP8.48□□□□□ -1.05
USP11-211ENST00000489111 TNFRSF1AP19438 455 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 TMEM50BP56557 158 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 ERVK11-1P61568 191 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 KLF9Q13886 244 aaPredicted RBP8.48□□□□□ -1.05
USP11-211ENST00000489111 OXA1LQ15070 435 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 TESK1Q15569 626 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 MPPED2Q15777 294 aa8.48□□□□□ -1.05
USP11-211ENST00000489111 SPIN3Q5JUX0 258 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms