RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 OR2G6Q5TZ20 316 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 BRD3OSQ6XYD6 125 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 VMO1Q7Z5L0 202 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 FAM185AQ8N0U4 392 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-218ENST00000489037 BPIFB6Q8NFQ5 453 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 GGHQ92820 318 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 CPNE2Q96FN4 548 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-218ENST00000489037 FAM234AQ9H0X4 552 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 BABAM2Q9NXR7 383 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 MTCH1Q9NZJ7 389 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 CNOT2Q9NZN8 540 aaKnown RBP11.78□□□□□ -0.52
BRCA1-218ENST00000489037 NKX1-2Q9UD57 310 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-218ENST00000489037 PCDHGB5Q9Y5G0 923 aa11.78□□□□□ -0.52
BRCA1-218ENST00000489037 IGHV1-69DA0A0B4J2H0 117 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 IGKV1-9A0A0C4DH69 117 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 CENPVL3A0A0U1RRI6 287 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 A0A1W2PPE2 198 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 A0A1W2PR64 198 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 H0YJX3 145 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 M0R1W7 72 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 ALX3O95076 343 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 IGHV1-69P01742 117 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 GNAO1P09471 354 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 EEF1B2P24534 225 aaKnown RBP11.77□□□□□ -0.53
BRCA1-218ENST00000489037 UBA52P62987 128 aaKnown RBP11.77□□□□□ -0.53
BRCA1-218ENST00000489037 GUCA2AQ02747 115 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 PDZK1IP1Q13113 114 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 CDK5R1Q15078 307 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 C1orf122Q6ZSJ8 110 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 PARP16Q8N5Y8 322 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 ZDHHC22Q8N966 263 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 ASCC1Q8N9N2 400 aaKnown RBP11.77□□□□□ -0.53
BRCA1-218ENST00000489037 ZSCAN4Q8NAM6 433 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-218ENST00000489037 OR52N1Q8NH53 320 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 TFAP2CQ92754 450 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 GCDHQ92947 438 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-218ENST00000489037 SLC25A28Q96A46 364 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 ELL3Q9HB65 397 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-218ENST00000489037 PLCXD1Q9NUJ7 323 aa11.77□□□□□ -0.53
BRCA1-218ENST00000489037 MYL12BO14950 172 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 SULT1B1O43704 296 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 TK1P04183 234 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 RAB3AP20336 220 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 PRTN3P24158 256 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 SOX2P48431 317 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 CEBPDP49716 269 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-218ENST00000489037 TAS2R43P59537 309 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 RPL31P62899 125 aaKnown RBP11.76□□□□□ -0.53
BRCA1-218ENST00000489037 COL10A1Q03692 680 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 RUSC1-AS1Q66K80 236 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 AHSA2Q719I0 299 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 FAM58AQ8N1B3 248 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 PPP1R35Q8TAP8 253 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 RFT1Q96AA3 541 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 METTL8Q9H825 291 aaKnown RBP11.76□□□□□ -0.53
BRCA1-218ENST00000489037 NOX4Q9NPH5 578 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 ESM1Q9NQ30 184 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 SIRT7Q9NRC8 400 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 CLEC2DQ9UHP7 191 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 PSORS1C1Q9UIG5 152 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 ZNF281Q9Y2X9 895 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
BRCA1-218ENST00000489037 DSCAML1Q8TD84 2053 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 DNAJC9-AS1A6NH13 148 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 OGG1O15527 345 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 SPRY1O43609 319 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-218ENST00000489037 XPNPEP2O43895 674 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 TMEM225BP0DP42 221 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 PRKACAP17612 351 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 BCL3P20749 454 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 PPP3R1P63098 170 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 DEFB112Q30KQ8 113 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 METAP1DQ6UB28 335 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-218ENST00000489037 C12orf54Q6X4T0 127 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 GDPD3Q7L5L3 318 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 SATL1Q86VE3 508 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 PDZD9Q8IXQ8 264 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 SAXO1Q8IYX7 474 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 FBLIM1Q8WUP2 373 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 SMIM19Q96E16 107 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 SNX22Q96L94 193 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 ZNF48Q96MX3 618 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-218ENST00000489037 SPACA5Q96QH8 159 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 GPER1Q99527 375 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 RHOFQ9HBH0 211 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 ERGIC3Q9Y282 383 aa11.75□□□□□ -0.53
BRCA1-218ENST00000489037 F8VVB4 439 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 F8VWA3 439 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 K7N7A8 449 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 SH2D1BO14796 132 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 ANGPTL7O43827 346 aa11.74□□□□□ -0.53
BRCA1-218ENST00000489037 HAND1O96004 215 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms