RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 APOC1P02654 83 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 HLXQ14774 488 aaPredicted RBP16.51■□□□□ 0.23
CCM2-216ENST00000488727 STEAP1BQ6NZ63 245 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 C20orf204Q6ZNR8 217 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 ZNF767PQ75MW2 155 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 SLC36A1Q7Z2H8 476 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 DTX2Q86UW9 622 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 C1orf174Q8IYL3 243 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 FBXL14Q8N1E6 418 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 IGFBPL1Q8WX77 278 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 LURAP1Q96LR2 239 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 SYT3Q9BQG1 590 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 SEC22CQ9BRL7 303 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 MGAT4AQ9UM21 535 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 LAMP3Q9UQV4 416 aa16.51■□□□□ 0.23
CCM2-216ENST00000488727 IGLV3-9A0A075B6K5 115 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 AKR7A2O43488 359 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 ANXA7P20073 488 aaKnown RBP16.5■□□□□ 0.23
CCM2-216ENST00000488727 GSK3AP49840 483 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 PRSS12P56730 875 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 MBNL2Q5VZF2 373 aaKnown RBP16.5■□□□□ 0.23
CCM2-216ENST00000488727 OR13C9Q8NGT0 318 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 OR2AE1Q8NHA4 323 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 AQP3Q92482 292 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 FAM46BQ96A09 425 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 GINS4Q9BRT9 223 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 PLK3Q9H4B4 646 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 GPR84Q9NQS5 396 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 DUSP13Q9UII6 198 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 SETXQ7Z333 2677 aaKnown RBP16.5■□□□□ 0.23
CCM2-216ENST00000488727 CD74P04233 296 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 CD3DP04234 171 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 UNC119Q13432 240 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 GK2Q14410 553 aaPredicted RBP16.5■□□□□ 0.23
CCM2-216ENST00000488727 EFNB3Q15768 340 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 SWI5Q1ZZU3 235 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 ZNF718Q3SXZ3 478 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 MOGAT2Q3SYC2 334 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 ZNF260Q3ZCT1 412 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 C11orf71Q6IPW1 123 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 NLRC3Q7RTR2 1065 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 OR2W3Q7Z3T1 314 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 OR5AS1Q8N127 324 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 OR11H4Q8NGC9 324 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 OR4D10Q8NGI6 311 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 OR5L1Q8NGL2 311 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 CBLN4Q9NTU7 201 aa16.5■□□□□ 0.23
CCM2-216ENST00000488727 TMEM14DPA8MWL7 114 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 RAB27BO00194 218 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 VSIG8P0DPA2 414 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 TUBG1P23258 451 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 DNASE1P24855 282 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 KLF3P57682 345 aaPredicted RBP16.49■□□□□ 0.23
CCM2-216ENST00000488727 SNRPD2P62316 118 aaKnown RBP16.49■□□□□ 0.23
CCM2-216ENST00000488727 ZNF92Q03936 586 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 ALKBH6Q3KRA9 238 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 OR10K2Q6IF99 312 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 FBXW12Q6X9E4 464 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 Q6ZSR3 168 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 CCDC54Q8NEL0 328 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 CMBLQ96DG6 245 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 TUBG2Q9NRH3 451 aa16.49■□□□□ 0.23
CCM2-216ENST00000488727 PDZD2O15018 2839 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 MEIS3P1A6NDR6 274 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 VSTM5A8MXK1 200 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 B9A039 149 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 G3V3Q6 166 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 GIPP09681 153 aaPredicted RBP16.48■□□□□ 0.23
CCM2-216ENST00000488727 VSIG10L2P0DP72 767 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 GCH1P30793 250 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 ZNF93P35789 620 aaPredicted RBP16.48■□□□□ 0.23
CCM2-216ENST00000488727 PSG7Q13046 419 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 OR52H1Q8NGJ2 320 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 OR51S1Q8NGJ8 323 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 OR14K1Q8NGZ2 314 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 SGK3Q96BR1 496 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 PGAM5Q96HS1 289 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 ALX4Q9H161 411 aaPredicted RBP16.48■□□□□ 0.23
CCM2-216ENST00000488727 MGAT4CQ9UBM8 478 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 ZNF69Q9UC07 566 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 PLEKHA6Q9Y2H5 1048 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 ANKRD17O75179 2603 aaKnown RBP16.48■□□□□ 0.23
CCM2-216ENST00000488727 A0A0U1RQV5 110 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 RAB3DO95716 219 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 IGHV3-13P01766 116 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 MALLQ13021 153 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 COMMD2Q86X83 199 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 SPSB4Q96A44 273 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 CCL19Q99731 98 aa16.48■□□□□ 0.23
CCM2-216ENST00000488727 XRCC2O43543 280 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 OR2A4O95047 310 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 RAC2P15153 192 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 GFOD2Q3B7J2 385 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 LYZL4Q96KX0 146 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 OR2A7Q96R45 310 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 SLC25A21Q9BQT8 299 aaPredicted RBP16.47■□□□□ 0.23
CCM2-216ENST00000488727 SOX7Q9BT81 388 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 REPIN1Q9BWE0 567 aaKnown RBP16.47■□□□□ 0.23
CCM2-216ENST00000488727 OR10A2Q9H208 303 aa16.47■□□□□ 0.23
CCM2-216ENST00000488727 MYOZ1Q9NP98 299 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms