RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CAPZA1P52907 286 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 IKZF1Q13422 519 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 LRRC10Q5BKY1 277 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 SYT6Q5T7P8 510 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-219ENST00000488186 STUMQ69YW2 141 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 TMEM91Q6ZNR0 172 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 RNF144BQ7Z419 303 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 CDH26Q8IXH8 852 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 FOXRED1Q96CU9 486 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-219ENST00000488186 C1orf159Q96HA4 380 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 DNTTIP1Q9H147 329 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 METTL9Q9H1A3 318 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 RHOFQ9HBH0 211 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 OR5V1Q9UGF6 321 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 SSR3Q9UNL2 185 aa13.13□□□□□ -0.31
C9orf3-219ENST00000488186 TRAV20A0A0B4J274 112 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 TRDV1A0A1B0GX56 115 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 F5H0A9 414 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-219ENST00000488186 PHF1O43189 567 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-219ENST00000488186 SC5DO75845 299 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 KNG1P01042 644 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 CSTBP04080 98 aaKnown RBP13.12□□□□□ -0.31
C9orf3-219ENST00000488186 CALCBP10092 127 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 CD36P16671 472 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 MYL9P24844 172 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 NPBWR2P48146 333 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 BMXP51813 675 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 SNU13P55769 128 aaKnown RBP13.12□□□□□ -0.31
C9orf3-219ENST00000488186 ZP1P60852 638 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 IL13RA1P78552 427 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 KRTAP1-1Q07627 177 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 ATPAF1Q5TC12 328 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-219ENST00000488186 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-219ENST00000488186 PXT1Q8NFP0 134 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 ANGPTL6Q8NI99 470 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 ST8SIA4Q92187 359 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 MUL1Q969V5 352 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 HES4Q9HCC6 221 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
C9orf3-219ENST00000488186 HIF1ANQ9NWT6 349 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 KAAG1Q9UBP8 84 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 GSTK1Q9Y2Q3 226 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
C9orf3-219ENST00000488186 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
C9orf3-219ENST00000488186 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 DVL1O14640 695 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 PDCD5O14737 125 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 SH2D1BO14796 132 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 TNFRSF13BO14836 293 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-219ENST00000488186 KDM4BO94953 1096 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 HTR3BO95264 441 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 GALP22466 123 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 OR3A4PP47883 348 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-219ENST00000488186 SEC61A1P61619 476 aaKnown RBP13.11□□□□□ -0.31
C9orf3-219ENST00000488186 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-219ENST00000488186 AWAT2Q6E213 333 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 ZNF788Q6ZQV5 615 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 FAM216BQ8N7L0 139 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 TMEM186Q96B77 213 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-219ENST00000488186 HMG20AQ9NP66 347 aa13.11□□□□□ -0.31
C9orf3-219ENST00000488186 MRPS28Q9Y2Q9 187 aaKnown RBP13.11□□□□□ -0.31
C9orf3-219ENST00000488186 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 LOC105371242A0A075B767 164 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 IGKV1-12A0A0C4DH73 117 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 A8MV72 311 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 F8VVB4 439 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 F8VWA3 439 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 CDRT1O95170 752 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 IGKV1D-12P01611 117 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 CHRM2P08172 466 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 NDUFB7P17568 137 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 ZFP36P26651 326 aaKnown RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 RANBP1P43487 201 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 MTNR1BP49286 362 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 PSMD7P51665 324 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 GP2P55259 537 aaKnown RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 GPR176Q14439 515 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 C22orf42Q6IC83 251 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 FAHD2BQ6P2I3 314 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 GLIPR1L1Q6UWM5 242 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 ZNF561Q8N587 486 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 TMEM185AQ8NFB2 350 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 FAHD2AQ96GK7 314 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 GAFA1Q96PS6 74 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 UQCC2Q9BRT2 126 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 CNTD2Q9H8S5 307 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 CTSZQ9UBR2 303 aa13.1□□□□□ -0.31
C9orf3-219ENST00000488186 SLC25A10Q9UBX3 287 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 FN1P02751 2386 aaKnown RBP13.1□□□□□ -0.31
C9orf3-219ENST00000488186 A0A0G2JMP0 313 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 LOC100506127A0A0U1RQW1 187 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 A0A0X1KG70 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms