RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SC5DO75845 299 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 OR2A4O95047 310 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 IGLV6-57P01721 117 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 TRGV3P03979 118 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 HOXB8P17481 243 aaPredicted RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 LGALS3P17931 250 aaKnown RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 M6PRP20645 277 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 PTNP21246 168 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 HLA-DMAP28067 261 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 SLC6A1P30531 599 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 ACOT2P49753 483 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 KLF3P57682 345 aaPredicted RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 CARD18P57730 90 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 TAS2R60P59551 318 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 MEF2BQ02080 365 aaPredicted RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 TMEM241Q24JQ0 296 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 HNRNPA1L2Q32P51 320 aaKnown RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 KRTAP25-1Q3LHN0 102 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 CAVIN4Q5BKX8 364 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 PDZD11Q5EBL8 140 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 ZNF660Q6AZW8 331 aaPredicted RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 FAM231DQ6ZW35 169 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 TRMT10CQ7L0Y3 403 aaKnown RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 FAM19A1Q7Z5A9 133 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 ASCC1Q8N9N2 400 aaKnown RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 OR5H2Q8NGV7 314 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 PPP1R36Q96LQ0 422 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 OR2V2Q96R30 315 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 OR2A7Q96R45 310 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 TM2D3Q9BRN9 247 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 PLA2G12AQ9BZM1 189 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 DSN1Q9H410 356 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 ABCB9Q9NP78 766 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 ZNF230Q9UIE0 474 aaPredicted RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 RAB23Q9ULC3 237 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 SLC7A11Q9UPY5 501 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 CFL2Q9Y281 166 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 AK9Q5TCS8 1911 aa1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 BAZ1BQ9UIG0 1483 aaKnown RBP1.3□□□□□ -2.2
R3HDM1-219ENST00000488035 ADAMTSL3P82987 1691 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 A0A0J9YYE9 177 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 SLC5A10A0PJK1 596 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 PRMT5O14744 637 aaPredicted RBP1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 PLXNB1O43157 2135 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 ENSAO43768 121 aaKnown RBP1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 ENTPD6O75354 484 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 TRBC1P01850 177 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 RLN2P04090 185 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 CDK1P06493 297 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 TGFBR2P37173 567 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 IHHQ14623 411 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 TOMM34Q15785 309 aaPredicted RBP1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 CEACAM16Q2WEN9 425 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 ZNF404Q494X3 552 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 CLLU1OSQ5K130 101 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 CLEC18BQ6UXF7 455 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 NELFCDQ8IXH7 590 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 CA13Q8N1Q1 262 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 OR13C9Q8NGT0 318 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 OR8S1Q8NH09 359 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 C22orf15Q8WYQ4 148 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 OTUB2Q96DC9 234 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 QKIQ96PU8 341 aaKnown RBP eCLIP1.29□□□□□ -2.21e-6■■■■□ 25
R3HDM1-219ENST00000488035 TM6SF2Q9BZW4 377 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 API5Q9BZZ5 524 aaKnown RBP1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 ACOT13Q9NPJ3 140 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 C12orf4Q9NQ89 552 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 PARP11Q9NR21 331 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 TAS2R1Q9NYW7 299 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 ANXA10Q9UJ72 324 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 INSIG2Q9Y5U4 225 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 TNIKQ9UKE5 1360 aa1.29□□□□□ -2.2
R3HDM1-219ENST00000488035 VWA8A3KMH1 1905 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 KIR2DS1A0A191URI9 304 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 LOC389332A0A1B0GUA5 103 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 IGLL5B9A064 214 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 FFAR1O14842 300 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 CBR3O75828 277 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 CD8AP01732 235 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 TAC1P20366 129 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 GPR4P46093 362 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 GUSBP1Q15486 140 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 SSX1Q16384 188 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 HSP90AA4PQ58FG1 418 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 ACTL10Q5JWF8 245 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 SYT6Q5T7P8 510 aaPredicted RBP1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 PID1Q7Z2X4 250 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 SYS1Q8N2H4 156 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 OR52K1Q8NGK4 314 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 UBA3Q8TBC4 463 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 LRRC39Q96DD0 335 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 FMC1Q96HJ9 113 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 NAP1L5Q96NT1 182 aaPredicted RBP1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 THTPAQ9BU02 230 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 ZNF436Q9C0F3 470 aaPredicted RBP1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 SRRQ9GZT4 340 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 POMKQ9H5K3 350 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 INIPQ9NRY2 104 aa1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 RBM22Q9NW64 420 aaKnown RBP eCLIP1.28□□□□□ -2.2
R3HDM1-219ENST00000488035 ZNF586Q9NXT0 402 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms