RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RGS7BPQ6MZT1 257 aaPredicted RBP8.04□□□□□ -1.12
SF3B1-211ENST00000487698 Q6ZR03 302 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 OR51S1Q8NGJ8 323 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 EMG1Q92979 244 aaKnown RBP8.04□□□□□ -1.12
SF3B1-211ENST00000487698 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 TINAGL1Q9GZM7 467 aaPredicted RBP8.04□□□□□ -1.12
SF3B1-211ENST00000487698 IFT46Q9NQC8 304 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 NPDC1Q9NQX5 325 aaPredicted RBP8.04□□□□□ -1.12
SF3B1-211ENST00000487698 PLEKHJ1Q9NW61 149 aa8.04□□□□□ -1.12
SF3B1-211ENST00000487698 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 TMEM210A6NLX4 147 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 ATP6V1G2-DDX39BF2Z307 99 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 H0YL77 283 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 TRAPPC2LH3BP13 241 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 BOLA2-SMG1P6H3BVE0 249 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 M0QYG6 137 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 TIMM8AO60220 97 aaPredicted RBP8.03□□□□□ -1.12
SF3B1-211ENST00000487698 PDCD6O75340 191 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 PEX14O75381 377 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 DHFRP00374 187 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 CD40P25942 277 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 FABP6P51161 128 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF154Q13106 437 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 ARFRP1Q13795 201 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 MEF2DQ14814 521 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 RBMS2Q15434 407 aaKnown RBP8.03□□□□□ -1.12
SF3B1-211ENST00000487698 OR8G1Q15617 311 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 NKAPLQ5M9Q1 402 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 ALKBH2Q6NS38 261 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF782Q6ZMW2 699 aaPredicted RBP8.03□□□□□ -1.12
SF3B1-211ENST00000487698 AKAP14Q86UN6 197 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 TMEM171Q8WVE6 324 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 RADILQ96JH8 1075 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 SULT4A1Q9BR01 284 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 GHITMQ9H3K2 345 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 RHOFQ9HBH0 211 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 TMEM100Q9NV29 134 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 SLC2A8Q9NY64 477 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 FZR1Q9UM11 496 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 OSGIN2Q9Y236 505 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 SPEF1Q9Y4P9 236 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 HIVEP3Q5T1R4 2406 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 DIDO1Q9BTC0 2240 aaKnown RBP8.03□□□□□ -1.12
SF3B1-211ENST00000487698 IGLV3-9A0A075B6K5 115 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 HMX3A6NHT5 357 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 PRSS44E7EML9 344 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 RHBDL1O75783 438 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 IGHV3-13P01766 116 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 PMELP40967 661 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 ASCL1P50553 236 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 ERVK11-1P61568 191 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 FBXL19-AS1Q494R0 122 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 HOGA1Q86XE5 327 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 BATF2Q8N1L9 274 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 SCCPDHQ8NBX0 429 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 HPS1Q92902 700 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 SLC6A7Q99884 636 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 TLNRD1Q9H1K6 362 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 RCC2Q9P258 522 aaKnown RBP8.03□□□□□ -1.12
SF3B1-211ENST00000487698 IL36RNQ9UBH0 155 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 POU2F3Q9UKI9 436 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 FLVCR2Q9UPI3 526 aa8.03□□□□□ -1.12
SF3B1-211ENST00000487698 A0A0A6YYJ9 748 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 CCL21O00585 134 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 ARPC1BO15143 372 aaKnown RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 AMY2AP04746 511 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 HNRNPCP07910 306 aaKnown RBP eCLIP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 PPP3CBP16298 524 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 FUT3P21217 361 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 HRH1P35367 487 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 RPS23P62266 143 aaKnown RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 ZMYND11Q15326 602 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 MICBQ29980 383 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 MPV17LQ2QL34 196 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 RNASE10Q5GAN6 216 aaKnown RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 TMEM108Q6UXF1 575 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 LINC00596Q86U02 117 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 NUP37Q8NFH4 326 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 GIMAP1Q8WWP7 306 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 ZNF488Q96MN9 340 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 FAAP24Q9BTP7 215 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 PLK3Q9H4B4 646 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 NKIRAS2Q9NYR9 191 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 AK3Q9UIJ7 227 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 PLEKHA6Q9Y2H5 1048 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 POLDIP2Q9Y2S7 368 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 ANKHD1Q8IWZ3 2542 aaKnown RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 A0A1B0GUH1 482 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 TPD52L2O43399 206 aaKnown RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 OR7C1O76099 320 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 ACAA1P09110 424 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-211ENST00000487698 PGA5P0DJD9 388 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 PTAFRP25105 342 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 CHRNB4P30926 498 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 ADORA2A-AS1P86434 159 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 MAB21L1Q13394 359 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 IL13RA2Q14627 380 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 ACTBL2Q562R1 376 aa8.02□□□□□ -1.13
SF3B1-211ENST00000487698 VAX1Q5SQQ9 334 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms