RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 FOXI3A8MTJ6 420 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-206ENST00000487062 CCL21O00585 134 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 IGKV1D-12P01611 117 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 CD74P04233 296 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 CD3DP04234 171 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 AMY2AP04746 511 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 HNRNPCP07910 306 aaKnown RBP eCLIP6.02□□□□□ -1.45
SF3A3-206ENST00000487062 TRAPPC2P0DI81 140 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 TRAPPC2BP0DI82 140 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 FUT3P21217 361 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 PTAFRP25105 342 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 MPZP25189 248 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 HLA-DMAP28067 261 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 CHRNB4P30926 498 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 CALCRP30988 508 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 GLRXP35754 106 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 MPV17P39210 176 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 PMELP40967 661 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 FABP6P51161 128 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 RBM11P57052 281 aaKnown RBP6.02□□□□□ -1.45
SF3A3-206ENST00000487062 FGF12P61328 243 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 IL24Q13007 206 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 LY6DQ14210 128 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 RBMS2Q15434 407 aaKnown RBP6.02□□□□□ -1.45
SF3A3-206ENST00000487062 TAF9Q16594 264 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 TATDN3Q17R31 274 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 MPV17LQ2QL34 196 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 TMEM255AQ5JRV8 349 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 NHLRC3Q5JS37 347 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 PLAC9Q5JTB6 97 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 HAGHLQ6PII5 290 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-206ENST00000487062 SEZ6L2Q6UXD5 910 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 TMEM108Q6UXF1 575 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 AKAP14Q86UN6 197 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 GLCCI1Q86VQ1 547 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 FBXL14Q8N1E6 418 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 BPIFB2Q8N4F0 458 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 OR13G1Q8NGZ3 307 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 ST8SIA4Q92187 359 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 DVL3Q92997 716 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-206ENST00000487062 SLAMF9Q96A28 289 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 UPRTQ96BW1 309 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 RADILQ96JH8 1075 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 CLUHP3Q96NS8 147 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 FGF23Q9GZV9 251 aaPredicted RBP6.02□□□□□ -1.45
SF3A3-206ENST00000487062 C20orf85Q9H1P6 137 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 CXXC4Q9H2H0 198 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 OR51I2Q9H344 312 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 SCP2D1Q9UJQ7 156 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 OSGIN2Q9Y236 505 aa6.02□□□□□ -1.45
SF3A3-206ENST00000487062 DMXL2Q8TDJ6 3036 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 LOC400499M0QZD8 3231 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 HMX3A6NHT5 357 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 VSTM5A8MXK1 200 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 GEMIN2O14893 280 aaKnown RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 SSX5O60225 188 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 PDCD6O75340 191 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 NDUFB6O95139 128 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 IGHV3-13P01766 116 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 IFNA6P05013 189 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 SFTPBP07988 381 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 ACAA1P09110 424 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 ZNF250P15622 560 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 NAT1P18440 290 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 AMY2BP19961 511 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 BCL3P20749 454 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 CD40P25942 277 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 CHATP28329 748 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 CCKARP32238 428 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 KLF3P57682 345 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 RAB25P57735 213 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 TAS2R46P59540 309 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 IL13RA2Q14627 380 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 CARTPTQ16568 116 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 PIGYQ3MUY2 71 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 FAM76BQ5HYJ3 339 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 NKAPLQ5M9Q1 402 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 ATAD3CQ5T2N8 411 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 METTL11BQ5VVY1 283 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 FIP1L1Q6UN15 594 aaKnown RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 NCCRP1Q6ZVX7 275 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 TMEM17Q86X19 198 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 WFDC8Q8IUA0 241 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 FAM58AQ8N1B3 248 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 GVQW1Q8N7I0 195 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 SCCPDHQ8NBX0 429 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 OR51S1Q8NGJ8 323 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 OR4K15Q8NH41 348 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 EMG1Q92979 244 aaKnown RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 DACT3Q96B18 629 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 PRRT1Q99946 306 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 SPOCK3Q9BQ16 436 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 CMSS1Q9BQ75 279 aaKnown RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 SLC25A21Q9BQT8 299 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 NEURL2Q9BR09 285 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 CHST6Q9GZX3 395 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 ZNF442Q9H7R0 627 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 SPACA1Q9HBV2 294 aa6.01□□□□□ -1.45
SF3A3-206ENST00000487062 GPN1Q9HCN4 374 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-206ENST00000487062 MTCH1Q9NZJ7 389 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms