RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TNXAQ16473 311 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 C18orf21Q32NC0 220 aaPredicted RBP2.49□□□□□ -2.01
SMC4-218ENST00000486711 SP6Q3SY56 376 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 ACTL10Q5JWF8 245 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 ZNF678Q5SXM1 525 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 FAM104BQ5XKR9 115 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 NT5DC3Q86UY8 548 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 ZDHHC22Q8N966 263 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 SPERTQ8NA61 448 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 ZNF721Q8TF20 911 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 SEC22CQ9BRL7 303 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 TSGA10Q9BZW7 698 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 INIPQ9NRY2 104 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 RMND1Q9NWS8 449 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 KIF26AQ9ULI4 1882 aaPredicted RBP2.49□□□□□ -2.01
SMC4-218ENST00000486711 ANKRD12Q6UB98 2062 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 TSPOAP1O95153 1857 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 BRCA1P38398 1863 aaKnown RBP2.48□□□□□ -2.01
SMC4-218ENST00000486711 GOLGA6L4A6NEF3 574 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 C16orf90A8MZG2 172 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 CLDN34H7C241 214 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 UPK1AO00322 258 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 IGKV1D-16P01601 117 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 SEC11BP0C7V7 166 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 CCL2P13500 99 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 TAC1P20366 129 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 TUFMP49411 452 aaKnown RBP2.48□□□□□ -2.01
SMC4-218ENST00000486711 XKP51811 444 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 CCL23P55773 120 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 TSPAN5P62079 268 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 GUSBP1Q15486 140 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 KPRPQ5T749 579 aaPredicted RBP2.48□□□□□ -2.01
SMC4-218ENST00000486711 TBPL2Q6SJ96 375 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 DRAXINQ8NBI3 349 aaPredicted RBP2.48□□□□□ -2.01
SMC4-218ENST00000486711 ZNF680Q8NEM1 530 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 OR8G5Q8NG78 346 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 OR1P1Q8NH06 330 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 UBA3Q8TBC4 463 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 YIPF5Q969M3 257 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 CCDC124Q96CT7 223 aaKnown RBP2.48□□□□□ -2.01
SMC4-218ENST00000486711 CFAP53Q96M91 514 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 SRRQ9GZT4 340 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 GOLPH3Q9H4A6 298 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 SND1-IT1Q9HBX3 110 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 OR2S2Q9NQN1 319 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 DHCR7Q9UBM7 475 aaKnown RBP2.48□□□□□ -2.01
SMC4-218ENST00000486711 ZNF780BQ9Y6R6 833 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 COL1A2P08123 1366 aa2.48□□□□□ -2.01
SMC4-218ENST00000486711 KIR2DS1A0A191URI9 304 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 LOC389332A0A1B0GUA5 103 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 A0A1B0GW15 77 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 OR2AT4A6NND4 320 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 hCG_2039718K7EN88 272 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 SLC37A4O43826 429 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 CD8AP01732 235 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 CD5P06127 495 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 SLC6A1P30531 599 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 ACOT2P49753 483 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 BNIP2Q12982 314 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 BIKQ13323 160 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 GPR176Q14439 515 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 ZNF404Q494X3 552 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 TTMPQ5BVD1 217 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 UBE2NLQ5JXB2 153 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 MRPL2Q5T653 305 aaKnown RBP2.47□□□□□ -2.01
SMC4-218ENST00000486711 FAM131AQ6UXB0 335 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 FA2HQ7L5A8 372 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 GAPTQ8N292 157 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 NELFBQ8WX92 580 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 NXF2Q9GZY0 626 aaKnown RBP2.47□□□□□ -2.01
SMC4-218ENST00000486711 RDH14Q9HBH5 336 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 DIABLOQ9NR28 239 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 CHMP5Q9NZZ3 219 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 TAC3Q9UHF0 121 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 CLEC2DQ9UHP7 191 aa2.47□□□□□ -2.01
SMC4-218ENST00000486711 KLF13Q9Y2Y9 288 aaPredicted RBP2.47□□□□□ -2.01
SMC4-218ENST00000486711 IZUMO1RA6ND01 250 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 COX7A2P2O60397 106 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 OR5AC1P0C628 307 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 IL12BP29460 328 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 TGFBR1P36897 503 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 RAB38P57729 211 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 RPS11P62280 158 aaKnown RBP eCLIP2.46□□□□□ -2.02
SMC4-218ENST00000486711 MEF2CQ06413 473 aaPredicted RBP2.46□□□□□ -2.02
SMC4-218ENST00000486711 SSX1Q16384 188 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 CLEC12AQ5QGZ9 265 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 HBMQ6B0K9 141 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 ZFAND6Q6FIF0 208 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 PRNTQ86SH4 94 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 CALHM3Q86XJ0 350 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 OR8A1Q8NGG7 326 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 CLHC1Q8NHS4 586 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 BLNKQ8WV28 456 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 TMEM239Q8WW34 195 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 IFT81Q8WYA0 676 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 PPP1R36Q96LQ0 422 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 YPEL4Q96NS1 127 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 PEBP4Q96S96 227 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 THTPAQ9BU02 230 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 DHX35Q9H5Z1 703 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms