RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TMEM171Q8WVE6 324 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 KCNK17Q96T54 332 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 SYT3Q9BQG1 590 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 CABLES2Q9BTV7 478 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 CBLN4Q9NTU7 201 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 MED29Q9NX70 200 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 B3GALT1Q9Y5Z6 326 aa9.31□□□□□ -0.92
CCDC171-208ENST00000486641 FAM221BA6H8Z2 402 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 SERPINE3A8MV23 424 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 M0R143 59 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 TK1P04183 234 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 MMP7P09237 267 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-208ENST00000486641 POLR2HP52434 150 aaKnown RBP9.3□□□□□ -0.92
CCDC171-208ENST00000486641 RRADP55042 308 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 RAB11AP62491 216 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 GNMTQ14749 295 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 ABCA11PQ4W5N1 156 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 PHLDA2Q53GA4 152 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 FAM90A2PQ658T7 463 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 LIAT1Q6ZQX7 453 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 LRTM2Q8N967 370 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 OR8B12Q8NGG6 310 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 NPRL2Q8WTW4 380 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 DNASE2BQ8WZ79 361 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 R3HDM4Q96D70 268 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 MSI2Q96DH6 328 aaKnown RBP9.3□□□□□ -0.92
CCDC171-208ENST00000486641 HIST1H2AAQ96QV6 131 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 NXT1Q9UKK6 140 aaKnown RBP9.3□□□□□ -0.92
CCDC171-208ENST00000486641 ATG2BQ96BY7 2078 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 NPIPA5E9PKD4 350 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 ADH1BP00325 375 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 TMEM225BP0DP42 221 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 FOLR1P15328 257 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 PGCP20142 388 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 GABRR1P24046 479 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 RUNX1Q01196 453 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 KISS1Q15726 138 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 SLC35G3Q8N808 338 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 OR5L1Q8NGL2 311 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 OR4D5Q8NGN0 318 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 TMEM208Q9BTX3 173 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 C11orf1Q9H5F2 150 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 NPIPA1Q9UND3 350 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 GOLT1BQ9Y3E0 138 aa9.3□□□□□ -0.92
CCDC171-208ENST00000486641 LOC102723971A0A1B0GUV8 181 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 DLEU1O43261 78 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 ONECUT2O95948 504 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 CD55P08174 381 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 NPSP0C0P6 89 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 MMP9P14780 707 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 EPHA1P21709 976 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 FXYD4P59646 89 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 HSF1Q00613 529 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 PAX5Q02548 391 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 HNF4GQ14541 408 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 P2RY6Q15077 328 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 SLC16A14Q7RTX9 510 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 C9orf40Q8IXQ3 194 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 TMEM123Q8N131 208 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 MRPL43Q8N983 215 aaKnown RBP9.29□□□□□ -0.92
CCDC171-208ENST00000486641 NOXO1Q8NFA2 376 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 OR5L2Q8NGL0 311 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 PTPMT1Q8WUK0 201 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-208ENST00000486641 OIT3Q8WWZ8 545 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 RBMXL1Q96E39 390 aaKnown RBP9.29□□□□□ -0.92
CCDC171-208ENST00000486641 EMC6Q9BV81 110 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 CERS4Q9HA82 394 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 PNO1Q9NRX1 252 aaKnown RBP9.29□□□□□ -0.92
CCDC171-208ENST00000486641 IL17BQ9UHF5 180 aa9.29□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF850A8MQ14 1090 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 PROB1E7EW31 1015 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 STMND1H3BQB6 276 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 HSPA12AO43301 675 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 PITX3O75364 302 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OPN1MWP04001 364 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 LINC00271P0C7V0 271 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OPN1MW2P0DN77 364 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OPN1MW3P0DN78 364 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 ALDH3B1P43353 468 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF121P58317 390 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 ERVFC1-1P60608 527 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 POU3F1Q03052 451 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 SLC25A26Q70HW3 274 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OR10G4Q8NGN3 311 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OR5C1Q8NGR4 320 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OR11L1Q8NGX0 322 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OR2AJ1Q8NGZ0 328 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 GAL3ST4Q96RP7 486 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 SRD5A3Q9H8P0 318 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 SDF2L1Q9HCN8 221 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 PLEKHJ1Q9NW61 149 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 GNG13Q9P2W3 67 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF732B4DXR9 585 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms