RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LDLRAD4O15165 306 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 ORC5O43913 435 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 HNRNPCP07910 306 aaKnown RBP eCLIP7.95□□□□□ -1.141e-6■□□□□ 10.1
TMEM39A-208ENST00000486159 SPNP16150 400 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 ZNF32P17041 273 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 SLC6A1P30531 599 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 SRP14P37108 136 aaKnown RBP7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 SLC6A9P48067 706 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 RAG2P55895 527 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 TAS2R20P59543 309 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 GALK2Q01415 458 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 SPRNQ5BIV9 151 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 ZBTB37Q5TC79 503 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 TMEM53Q6P2H8 277 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 C1orf229Q6ZS94 237 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 JAGN1Q8N5M9 183 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 DNAAF1Q8NEP3 725 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 OR51D1Q8NGF3 324 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 OR14K1Q8NGZ2 314 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 CREB3L1Q96BA8 519 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 ADAT3Q96EY9 351 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 TECTBQ96PL2 329 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 NEURL2Q9BR09 285 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 MARVELD1Q9BSK0 173 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 RNF121Q9H920 327 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 SCPEP1Q9HB40 452 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 TAAR3PQ9P1P4 343 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 ZNF107Q9UII5 783 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 MRPS7Q9Y2R9 242 aaKnown RBP7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.95□□□□□ -1.147e-8■■■■■ 31.3
TMEM39A-208ENST00000486159 ANK2Q01484 3957 aa7.95□□□□□ -1.14
TMEM39A-208ENST00000486159 ARHGAP32A7KAX9 2087 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 XRCC2O43543 280 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 RP2O75695 350 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 SERPINA5P05154 406 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 MMP7P09237 267 aaPredicted RBP7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 CDK2P24941 298 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 HLA-DMAP28067 261 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 FAUP35544 74 aaKnown RBP7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 GPR6P46095 362 aaPredicted RBP7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 HTR5AP47898 357 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 CLDN12P56749 244 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 LMO4P61968 165 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 CCL8P80075 99 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 PSG4Q00888 419 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 GPR176Q14439 515 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 RSPO1Q2MKA7 263 aaPredicted RBP7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 PNLDC1Q8NA58 520 aaKnown RBP7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 CPEB3Q8NE35 698 aaKnown RBP7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 SPSB1Q96BD6 273 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 CHST5Q9GZS9 411 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 WNT5BQ9H1J7 359 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 DPAGT1Q9H3H5 408 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 OPA3Q9H6K4 179 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 HIF1ANQ9NWT6 349 aa7.94□□□□□ -1.14
TMEM39A-208ENST00000486159 TMEM272A0A1B0GTI8 110 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 VSTM5A8MXK1 200 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 J3QW42 95 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 PPIHO43447 177 aaKnown RBP7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 TCF21O43680 179 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 RBBP9O75884 186 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 CHRM2P08172 466 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 CSF1P09603 554 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 HNF1AP20823 631 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 PRKACBP22694 351 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 ZNF93P35789 620 aaPredicted RBP7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 GDNFP39905 211 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 DVL1P1P54792 670 aaPredicted RBP7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 ACTBP60709 375 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 ACTG1P63261 375 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 DGCR2P98153 550 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 PLP2Q04941 152 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 RIPPLY1Q0D2K3 151 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 KLF9Q13886 244 aaPredicted RBP7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 ARL6IP1Q15041 203 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 CNN3Q15417 329 aaKnown RBP7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 PLA1AQ53H76 456 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 SPATA46Q5T0L3 261 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 RGS7BPQ6MZT1 257 aaPredicted RBP7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 ZNF774Q6NX45 483 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 COLCA1Q6ZS62 124 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 KRT74Q7RTS7 529 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 AKAP14Q86UN6 197 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 OR5AS1Q8N127 324 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 SLC30A7Q8NEW0 376 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 SEMA6DQ8NFY4 1073 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 OR51A2Q8NGJ7 313 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 AKR7LQ8NHP1 331 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 KCNG3Q8TAE7 436 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 RDH5Q92781 318 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 FAM46BQ96A09 425 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 SPSB4Q96A44 273 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 SGK3Q96BR1 496 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 FAM71F1Q96KD3 344 aaPredicted RBP7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 C1QTNF5Q9BXJ0 243 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 ATG5Q9H1Y0 275 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 CNTD2Q9H8S5 307 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 ZNF319Q9P2F9 582 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 RHBDD3Q9Y3P4 386 aa7.93□□□□□ -1.14
TMEM39A-208ENST00000486159 NUBP2Q9Y5Y2 271 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms