RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 LOC105371242A0A075B767 164 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 IGHV2-70DA0A0C4DH43 119 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 IGKV1-12A0A0C4DH73 117 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 MAGEA13PA6NCF6 341 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 C22orf46C9J442 243 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 GABRPO00591 440 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 SIGLEC5O15389 551 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 PIN1P1O15428 100 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 FCN3O75636 299 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 IGKV1D-12P01611 117 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 MAS1P04201 325 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ACAA1P09110 424 aaPredicted RBP9.84□□□□□ -0.83
HPS4-214ENST00000485842 CPEP16870 476 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 NDUFB7P17568 137 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 PRKACAP17612 351 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 IGFBP3P17936 291 aaPredicted RBP9.84□□□□□ -0.83
HPS4-214ENST00000485842 PSMB9P28065 219 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 NPBWR2P48146 333 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 CAPZA1P52907 286 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ZP1P60852 638 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 GPR50Q13585 617 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 TPBGQ13641 420 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 CHRFAM7AQ494W8 412 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ACSM3Q53FZ2 586 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 LRRC10Q5BKY1 277 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ARMCX4Q5H9R4 360 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 FAM27D1Q5T7N8 215 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ATPAF1Q5TC12 328 aaPredicted RBP9.84□□□□□ -0.83
HPS4-214ENST00000485842 ZNF773Q6PK81 442 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ZNF788Q6ZQV5 615 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 Q8IYB0 196 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 SPARTQ8N0X7 666 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 FAM58AQ8N1B3 248 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 CD177Q8N6Q3 437 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 TNFAIP8L1Q8WVP5 186 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 MED30Q96HR3 178 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 BEX2Q9BXY8 128 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 DNTTIP1Q9H147 329 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ELL3Q9HB65 397 aaPredicted RBP9.84□□□□□ -0.83
HPS4-214ENST00000485842 HES4Q9HCC6 221 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 TMEM160Q9NX00 188 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 IL36RNQ9UBH0 155 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 METRNQ9UJH8 293 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 ZNF222Q9UK12 451 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 LRRC42Q9Y546 428 aa9.84□□□□□ -0.83
HPS4-214ENST00000485842 CRLF1O75462 422 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 GPX5O75715 221 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 RGS9O75916 674 aaPredicted RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 KNG1P01042 644 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 GATA3P23771 443 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 PRDX2P32119 198 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 ZNF93P35789 620 aaPredicted RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 SRP14P37108 136 aaKnown RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 OR3A4PP47883 348 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 DGUOKQ16854 277 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 KCTD21Q4G0X4 260 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 FIP1L1Q6UN15 594 aaKnown RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 BTNL3Q6UXE8 466 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 CEACAM19Q7Z692 300 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 PHC2Q8IXK0 858 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 SAXO1Q8IYX7 474 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 JAGN1Q8N5M9 183 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 ASCC1Q8N9N2 400 aaKnown RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 PNLDC1Q8NA58 520 aaKnown RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 ZNRF1Q8ND25 227 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 H1FXQ92522 213 aaKnown RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 NUDT16L1Q9BRJ7 211 aaKnown RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 C7orf69Q9H7B7 122 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 SLC25A10Q9UBX3 287 aaPredicted RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 LPAR3Q9UBY5 353 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 CDC42EP3Q9UKI2 254 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 FOXJ3Q9UPW0 622 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 POLR3KQ9Y2Y1 108 aaPredicted RBP9.83□□□□□ -0.84
HPS4-214ENST00000485842 MAB21L2Q9Y586 359 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 INSIG2Q9Y5U4 225 aa9.83□□□□□ -0.84
HPS4-214ENST00000485842 PPIAL4CA0A0B4J2A2 164 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 J3QLI3 93 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 ENSAO43768 121 aaKnown RBP9.82□□□□□ -0.84
HPS4-214ENST00000485842 KDM4BO94953 1096 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 ALDOBP05062 364 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 ADRA2CP18825 462 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 DUSP1P28562 367 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 PAX2Q02962 417 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 RSU1Q15404 277 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 TRAM1Q15629 374 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 NEDD8Q15843 81 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 SSX1Q16384 188 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 HSD17B12Q53GQ0 312 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 UBE2UQ5VVX9 321 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 CD276Q5ZPR3 534 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 UNQ9370/PRO34162Q6UXP9 181 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 BTN2A1Q7KYR7 527 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 C1QL2Q7Z5L3 287 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 OR10K1Q8NGX5 313 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 RAB40AQ8WXH6 277 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 FCGR1BQ92637 280 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 SDSLQ96GA7 329 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 S100A13Q99584 98 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 MRI1Q9BV20 369 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms