RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 SPACA5Q96QH8 159 aa9.74□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ELL3Q9HB65 397 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ONECUT1Q9UBC0 465 aa9.74□□□□□ -0.85
CDK5RAP2-217ENST00000484546 DUX4Q9UBX2 424 aa9.74□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SIRT4Q9Y6E7 314 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP2-217ENST00000484546 IGKV1D-17A0A075B6S4 117 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 A0A1W2PPH5 198 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 C22orf46C9J442 243 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TNFRSF13BO14836 293 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ANGPTL7O43827 346 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ALX3O95076 343 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TFF1P04155 84 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 CHRM2P08172 466 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 BCL3P20749 454 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 EPHA1P21709 976 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 FPR2P25090 351 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SNU13P55769 128 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 BLMHQ13867 455 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 KISS1Q15726 138 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 DGUOKQ16854 277 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 DDI2Q5TDH0 399 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 PRSS48Q7RTY5 328 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 FAM58AQ8N1B3 248 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ASCC1Q8N9N2 400 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ZSCAN4Q8NAM6 433 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ZNRF1Q8ND25 227 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 PGLYRP3Q96LB9 341 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 OR14A2Q96R54 314 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 PCGF1Q9BSM1 259 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TMED9Q9BVK6 235 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 DUSP21Q9H596 190 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TMEM138Q9NPI0 162 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 PAK1IP1Q9NWT1 392 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 MTCH1Q9NZJ7 389 aa9.73□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SVEP1Q4LDE5 3571 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ARHGAP32A7KAX9 2087 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TRAV40A0A0B4J280 105 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TRBV5-5A0A0J9YX44 114 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 A0A1W2PPK0 400 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ZNF879B4DU55 563 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TOX4O94842 621 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 AVPP01185 164 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 CD1AP06126 327 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 PPIAL4GP0DN37 164 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SELLP14151 372 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 BDKRB2P30411 391 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 CEBPDP49716 269 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 BMXP51813 675 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 CAV3P56539 151 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 GABARAPL2P60520 117 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 FGF12P61328 243 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ERVK11-1P61568 191 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 PAX8Q06710 450 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ACSM1Q08AH1 577 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 GPR157Q5UAW9 335 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 RBMS3Q6XE24 437 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SAXO1Q8IYX7 474 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 FAM185AQ8N0U4 392 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SVOPQ8N4V2 548 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 MS4A15Q8N5U1 240 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ZNF485Q8NCK3 441 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 OR51A2Q8NGJ7 313 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 PPP1R35Q8TAP8 253 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 ZNF418Q8TF45 676 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TNFAIP8L1Q8WVP5 186 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SGCDQ92629 289 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 SDSLQ96GA7 329 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 OR5M11Q96RB7 305 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 MS4A7Q9GZW8 240 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 CNTD2Q9H8S5 307 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 RHOFQ9HBH0 211 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 HES4Q9HCC6 221 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 RBFOX1Q9NWB1 397 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 RPUSD1Q9UJJ7 312 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 NUP50Q9UKX7 468 aa9.72□□□□□ -0.85
CDK5RAP2-217ENST00000484546 CUBNO60494 3623 aa9.71□□□□□ -0.85
CDK5RAP2-217ENST00000484546 TRBV23-1A0A0A0MS06 115 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 SH2D1BO14796 132 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 DENRO43583 198 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 TCF21O43680 179 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 HAND1O96004 215 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 CSTBP04080 98 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 CALCBP10092 127 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 AMY2BP19961 511 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 GABRR1P24046 479 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 ZNF93P35789 620 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 TGFBR2P37173 567 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 NPBWR2P48146 333 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 ARF6P62330 175 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 PAX2Q02962 417 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 COL10A1Q03692 680 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 RSU1Q15404 277 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 SPIN3Q5JUX0 258 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 LIPKQ5VXJ0 399 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 C1orf229Q6ZS94 237 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 GDPD3Q7L5L3 318 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 JAGN1Q8N5M9 183 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 CD177Q8N6Q3 437 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 OR52N4Q8NGI2 321 aa9.71□□□□□ -0.86
CDK5RAP2-217ENST00000484546 WDFY2Q96P53 400 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms