RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 HDHD3Q9BSH5 251 aaPredicted RBP11.35□□□□□ -0.59
CPNE1-225ENST00000483495 CHIAQ9BZP6 476 aa11.35□□□□□ -0.59
CPNE1-225ENST00000483495 OPN4Q9UHM6 478 aa11.35□□□□□ -0.59
CPNE1-225ENST00000483495 FAM215AQ9Y5M1 114 aa11.35□□□□□ -0.59
CPNE1-225ENST00000483495 IGKV1D-8A0A087WSZ0 117 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 GOSR2O14653 212 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 RGS11O94810 467 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 HLA-AP01891 365 aaKnown RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 BCL3P20749 454 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 FUT3P21217 361 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 S100A1P23297 94 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 FPR2P25090 351 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 HOXC12P31275 282 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 PER3P56645 1201 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 TAS2R31P59538 309 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 TSPAN5P62079 268 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 GNG3P63215 75 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 PPP1R1AQ13522 171 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 GRK1Q15835 563 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 CHRFAM7AQ494W8 412 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 AADACL3Q5VUY0 350 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 ZNF324BQ6AW86 544 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 ZNF573Q86YE8 665 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 BHLHE23Q8NDY6 225 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 TMEM185AQ8NFB2 350 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 OR13G1Q8NGZ3 307 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 MARCH1Q8TCQ1 289 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 MITD1Q8WV92 249 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 MAFIPQ8WZ33 124 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 CMSS1Q9BQ75 279 aaKnown RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 PPA2Q9H2U2 334 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 OR51B6Q9H340 312 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 ZNF701Q9NV72 531 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 MTCH1Q9NZJ7 389 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 ANXA10Q9UJ72 324 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 URB1O60287 2271 aaKnown RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 C9orf170A2RU37 121 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 SLC22A5O76082 557 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 IGLV1-44P01699 117 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 FCGR3AP08637 254 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 RAC2P15153 192 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 HLA-GP17693 338 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 IL32P24001 234 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 TIMP3P35625 211 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 UCP2P55851 309 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 SNRPD2P62316 118 aaKnown RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 SRSF4Q08170 494 aaKnown RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 SPATA46Q5T0L3 261 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 LPCAT3Q6P1A2 487 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 BEND4Q6ZU67 534 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 CXorf67Q86X51 503 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 ADAD2Q8NCV1 583 aaKnown RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 SLAMF9Q96A28 289 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 PKIBQ9C010 78 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 EHFQ9NZC4 300 aa11.34□□□□□ -0.59
CPNE1-225ENST00000483495 NOP16Q9Y3C1 178 aaKnown RBP11.34□□□□□ -0.59
CPNE1-225ENST00000483495 PTPRZ1P23471 2315 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-225ENST00000483495 F5H5P2 479 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 SNAPC5O75971 98 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 SIX6O95475 246 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF35P13682 527 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 TUBG1P23258 451 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 CD34P28906 385 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 IL24Q13007 206 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 LGALSLQ3ZCW2 172 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-225ENST00000483495 FAM76BQ5HYJ3 339 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 LY6G6FQ5SQ64 297 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 C1orf185Q5T7R7 199 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 DCAF12L2Q5VW00 463 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 TMEM211Q6ICI0 200 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 UXS1Q8NBZ7 420 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 WDR89Q96FK6 387 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-225ENST00000483495 ABHD17AQ96GS6 310 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 OR2J1Q9GZK6 312 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 OPN3Q9H1Y3 402 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-225ENST00000483495 OR51I2Q9H344 312 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 TUBG2Q9NRH3 451 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 DECR2Q9NUI1 292 aa11.33□□□□□ -0.6
CPNE1-225ENST00000483495 RCC2Q9P258 522 aaKnown RBP11.33□□□□□ -0.6
CPNE1-225ENST00000483495 PLSCR5A0PG75 271 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 IQCF6A8MYZ5 107 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 F8VVB4 439 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 F8VWA3 439 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 TRAPPC2LH3BP13 241 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 K7ENP7 123 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 SDCBPO00560 298 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-225ENST00000483495 HOXD4P09016 255 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-225ENST00000483495 SELEP16581 610 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 CA6P23280 308 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 ECI1P42126 302 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 NPY4RP50391 375 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 IL13RA1P78552 427 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 TMEM128Q5BJH2 165 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF660Q6AZW8 331 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms