RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 ZFHX3Q15911 3703 aa7.28□□□□□ -1.24
SNX4-205ENST00000482965 TRBV5-5A0A0J9YX44 114 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 SPRY1O43609 319 aaPredicted RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 FCN3O75636 299 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 KNG1P01042 644 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 CD1AP06126 327 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 LIPFP07098 398 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 NDUFB7P17568 137 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 BCL3P20749 454 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 PRDX2P32119 198 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 CEBPDP49716 269 aaPredicted RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 ERVK11-1P61568 191 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 PAX8Q06710 450 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 ACSM1Q08AH1 577 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 PDZK1IP1Q13113 114 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 SCGB2A2Q13296 93 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 DOC2BQ14184 412 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 IRF3Q14653 427 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 MED22Q15528 200 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 DGUOKQ16854 277 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 C11orf91Q3C1V1 193 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 Q499Y3 187 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 FIP1L1Q6UN15 594 aaKnown RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 PRSS48Q7RTY5 328 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 SATL1Q86VE3 508 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 PRIMA1Q86XR5 153 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 Q8IYB0 196 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 FGFRL1Q8N441 504 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 CD177Q8N6Q3 437 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 PNLDC1Q8NA58 520 aaKnown RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 OR51A2Q8NGJ7 313 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 OR5D18Q8NGL1 313 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 H1FXQ92522 213 aaKnown RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 DACT3Q96B18 629 aaPredicted RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 CPNE2Q96FN4 548 aaPredicted RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 SDSLQ96GA7 329 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 OR5M11Q96RB7 305 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 GPER1Q99527 375 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 CKLFQ9UBR5 152 aa7.27□□□□□ -1.25
SNX4-205ENST00000482965 RPUSD1Q9UJJ7 312 aaKnown RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 LSM2Q9Y333 95 aaKnown RBP7.27□□□□□ -1.25
SNX4-205ENST00000482965 NIPBLQ6KC79 2804 aaeCLIP7.27□□□□□ -1.25
SNX4-205ENST00000482965 DSCAML1Q8TD84 2053 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 ZNF879B4DU55 563 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 F8VVB4 439 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 F8VWA3 439 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 DENRO43583 198 aaKnown RBP7.26□□□□□ -1.25
SNX4-205ENST00000482965 RRP9O43818 475 aaKnown RBP7.26□□□□□ -1.25
SNX4-205ENST00000482965 ANGPTL7O43827 346 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 HSMCR30P0CW71 290 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 TMEM225BP0DP42 221 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 PRKACAP17612 351 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 EPHA1P21709 976 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 BDKRB2P30411 391 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 NPBWR2P48146 333 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 SNU13P55769 128 aaKnown RBP7.26□□□□□ -1.25
SNX4-205ENST00000482965 CAV3P56539 151 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 FGF12P61328 243 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 RPS11P62280 158 aaKnown RBP eCLIP7.26□□□□□ -1.25
SNX4-205ENST00000482965 KISS1Q15726 138 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 DDI2Q5TDH0 399 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 ASPHD2Q6ICH7 369 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 ZNF529Q6P280 563 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 RNF144BQ7Z419 303 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 SAXO1Q8IYX7 474 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 FAM58AQ8N1B3 248 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 ZNF561Q8N587 486 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 ZSCAN4Q8NAM6 433 aaPredicted RBP7.26□□□□□ -1.25
SNX4-205ENST00000482965 ZNRF1Q8ND25 227 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 OR52N4Q8NGI2 321 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 THRSPQ92748 146 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 UFD1Q92890 307 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 ORAI1Q96D31 301 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 OR14A2Q96R54 314 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 DCTN5Q9BTE1 182 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 TMEM138Q9NPI0 162 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 RBFOX1Q9NWB1 397 aaKnown RBP7.26□□□□□ -1.25
SNX4-205ENST00000482965 MAB21L2Q9Y586 359 aa7.26□□□□□ -1.25
SNX4-205ENST00000482965 TRBV5-7A0A0A0MS05 114 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 IGKV1-12A0A0C4DH73 117 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 A0A1W2PPK0 400 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 A0A1W2PQ09 198 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 TOX4O94842 621 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 KDM4BO94953 1096 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 HAND1O96004 215 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 FSHBP01225 129 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 IGKV1D-12P01611 117 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 ALDOBP05062 364 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 CHRM2P08172 466 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 PPIAL4GP0DN37 164 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 CALCBP10092 127 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 FSTP19883 344 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 MAPK3P27361 379 aaPredicted RBP7.25□□□□□ -1.25
SNX4-205ENST00000482965 TGFBR2P37173 567 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 MAP2K4P45985 399 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 GABARAPL2P60520 117 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 ZP1P60852 638 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 ARF6P62330 175 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 COL10A1Q03692 680 aa7.25□□□□□ -1.25
SNX4-205ENST00000482965 METTL11BQ5VVY1 283 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms