RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TEX38Q6PEX7 206 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 SLC35E3Q7Z769 313 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 TRAPPC6BQ86SZ2 158 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 FOXRED2Q8IWF2 684 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 TPRX1Q8N7U7 411 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 OR8D4Q8NGM9 314 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 THEM6Q8WUY1 208 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 CREB3L1Q96BA8 519 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 SNX22Q96L94 193 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 SAR1AQ9NR31 198 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 INTS9Q9NV88 658 aaKnown RBP11.74□□□□□ -0.53
HDAC6-224ENST00000481929 IL20Q9NYY1 176 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 ENPP5Q9UJA9 477 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 PIGLQ9Y2B2 252 aa11.74□□□□□ -0.53
HDAC6-224ENST00000481929 A0A0U1RQV5 110 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 ARRDC5A6NEK1 342 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 IFNGP01579 166 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
HDAC6-224ENST00000481929 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-224ENST00000481929 STPG2Q8N412 459 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 DRAM1Q8N682 238 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 C5orf56Q8N8D9 126 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 TSSK6Q9BXA6 273 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 BAIAP2Q9UQB8 552 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 V9GYQ6 96 aa11.73□□□□□ -0.53
HDAC6-224ENST00000481929 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 FAM172BPA6NC97 362 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 RIIAD1A6NNX1 92 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 OOSP1A8MZH6 123 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 HCKP08631 526 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 H2AFXP16104 143 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-224ENST00000481929 ZNF3P17036 446 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 MPZP25189 248 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 PEX2P28328 305 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 RRM2P31350 389 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 CDX1P47902 265 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-224ENST00000481929 VEGFCP49767 419 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 GRK1Q15835 563 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 SAMD4BQ5PRF9 694 aaKnown RBP11.72□□□□□ -0.53
HDAC6-224ENST00000481929 PRAMEF5Q5TYX0 476 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 BAIAP2L2Q6UXY1 529 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 ASRGL1Q7L266 308 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 TRPM8Q7Z2W7 1104 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 OTOSQ8NHW6 89 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 TRMT10AQ8TBZ6 339 aaKnown RBP11.72□□□□□ -0.53
HDAC6-224ENST00000481929 TM2D3Q9BRN9 247 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 MED20Q9H944 212 aa11.72□□□□□ -0.53
HDAC6-224ENST00000481929 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDAC6-224ENST00000481929 TMEM82A0PJX8 343 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 NDUFAB1O14561 156 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 TOR1AO14656 332 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 FGF16O43320 207 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 IGHG2P01859 326 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 HES1Q14469 280 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 PNLIPRP3Q17RR3 467 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 GLYATQ6IB77 296 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 RASSF6Q6ZTQ3 369 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 THNSL2Q86YJ6 484 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 OR2T33Q8NG76 320 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 OTULINQ96BN8 352 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 RNFT2Q96EX2 444 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 HOPXQ9BPY8 73 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-224ENST00000481929 CHST6Q9GZX3 395 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 GPR84Q9NQS5 396 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 GPR173Q9NS66 373 aa11.71□□□□□ -0.53
HDAC6-224ENST00000481929 UBE2J1Q9Y385 318 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-224ENST00000481929 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
HDAC6-224ENST00000481929 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
HDAC6-224ENST00000481929 ACOD1A6NK06 481 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 FAM183AA6NL82 134 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 CCRL2O00421 344 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 GMNNO75496 209 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
HDAC6-224ENST00000481929 TMEM11P17152 192 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 GABRR1P24046 479 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 CDK2P24941 298 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 CD34P28906 385 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 IL24Q13007 206 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 FHL3Q13643 280 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 RBM39Q14498 530 aaKnown RBP11.7□□□□□ -0.54
HDAC6-224ENST00000481929 CLVS2Q5SYC1 327 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 SLX4IPQ5VYV7 408 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 OR9Q2Q8NGE9 314 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 OR51E1Q8TCB6 317 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 C4orf3Q8WVX3 66 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 MCUR1Q96AQ8 359 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 GON7Q9BXV9 100 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 PKIBQ9C010 78 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 ZNF286AQ9HBT8 521 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 PCDHB16Q9NRJ7 776 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 DNAJB9Q9UBS3 223 aa11.7□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A18PA6NE21 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A16PA6NEW6 464 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms