RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MITFO75030 526 aaPredicted RBP5.77□□□□□ -1.49
COL17A1-205ENST00000480127 FBXO24O75426 580 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 FCN3O75636 299 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 ATP5HO75947 161 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 TK1P04183 234 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 UBCP0CG48 685 aaKnown RBP5.77□□□□□ -1.49
COL17A1-205ENST00000480127 PGA5P0DJD9 388 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 T-ENOLP0DO92 83 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 CCL3L1P16619 93 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 PRKACAP17612 351 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 SLC2A5P22732 501 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 PEX2P28328 305 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 DAPP51397 102 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 ATP1B3P54709 279 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 MTCP1P56278 107 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 LOXL3P58215 753 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 COL10A1Q03692 680 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 IL18R1Q13478 541 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 KPNB1Q14974 876 aaKnown RBP5.77□□□□□ -1.49
COL17A1-205ENST00000480127 ATP6AP1Q15904 470 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 FAM76BQ5HYJ3 339 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 LIAT1Q6ZQX7 453 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 SLC25A26Q70HW3 274 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 AMIGO2Q86SJ2 522 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 TMEM219Q86XT9 240 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 Q8IYB0 196 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 ENTHD1Q8IYW4 607 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 ELMOD2Q8IZ81 293 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 OR13C3Q8NGS6 347 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 MRAPQ8TCY5 172 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 PPP1R14AQ96A00 147 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 SDSLQ96GA7 329 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF714Q96N38 554 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 PRSS22Q9GZN4 317 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 ADGRL4Q9HBW9 690 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 SIGLEC9Q9Y336 463 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 MAB21L2Q9Y586 359 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 HILPDAQ9Y5L2 63 aa5.77□□□□□ -1.49
COL17A1-205ENST00000480127 TRGV10A0A0A0MS01 117 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 A0A1W2PQL4 384 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 A0A1W2PRX2 142 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 PQLC2LA1A4F0 135 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 DHRS7CA6NNS2 312 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 TOR1AO14656 332 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 SH2D1BO14796 132 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CLIC3O95833 236 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 TTRP02766 147 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 HCKP08631 526 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 HTR1AP08908 422 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 OR2T7P0C7T2 308 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF728P0DKX0 622 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 PF4V1P10720 104 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF44P15621 663 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 PRKACBP22694 351 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 PAX6P26367 422 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 HTR1FP30939 366 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 VDAC2P45880 294 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 RBP2P50120 134 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 FUT6P51993 359 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 ACTC1P68032 377 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 ACTA1P68133 377 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 IL24Q13007 206 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 RBM39Q14498 530 aaKnown RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 TP53I3Q53FA7 332 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 OXLD1Q5BKU9 147 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 C9orf152Q5JTZ5 239 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 VAX1Q5SQQ9 334 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 TMEM200BQ69YZ2 307 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 FAHD1Q6P587 224 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 ZBTB49Q6ZSB9 765 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 LYG1Q8N1E2 194 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CD177Q8N6Q3 437 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CCDC54Q8NEL0 328 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 OR4F17Q8NGA8 305 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 TSEN15Q8WW01 171 aaKnown RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 PP6455Q8WZ26 134 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CFHR4Q92496 578 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 R3HDM4Q96D70 268 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CPNE2Q96FN4 548 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 OR4F4Q96R69 305 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 GPER1Q99527 375 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CIB1Q99828 191 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 NRIP2Q9BQI9 281 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CADM1Q9BY67 442 aaKnown RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 PKIBQ9C010 78 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 CHST6Q9GZX3 395 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 GAL3ST2Q9H3Q3 398 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 AURKAIP1Q9NWT8 199 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 FBLN5Q9UBX5 448 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 MRM2Q9UI43 246 aaKnown RBP5.76□□□□□ -1.49
COL17A1-205ENST00000480127 FOXJ3Q9UPW0 622 aa5.76□□□□□ -1.49
COL17A1-205ENST00000480127 TET2Q6N021 2002 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-205ENST00000480127 ZAR1LA6NP61 321 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 J3QLW9 94 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 K7N7A8 449 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 SIRPB1O00241 398 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 XPNPEP2O43895 674 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 HAND1O96004 215 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 PF4P02776 101 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms