RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 GEMIN2O14893 280 aaKnown RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 NOS1APO75052 506 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 ZNF250P15622 560 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 BCL3P20749 454 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 CALCRP30988 508 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 MPV17P39210 176 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 ZNF83P51522 516 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 ERVS71-1P61550 626 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 NKX6-1P78426 367 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 MRPS15P82914 257 aaKnown RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 CDK10Q15131 360 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 OR8G1Q15617 311 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 RGS7BPQ6MZT1 257 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 FAAP20Q6NZ36 180 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 HAGHLQ6PII5 290 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 GLDNQ6ZMI3 551 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 IDO2Q6ZQW0 420 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 C6orf201Q7Z4U5 140 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 TMEM17Q86X19 198 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 LIX1LQ8IVB5 337 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 GVQW1Q8N7I0 195 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 DRAXINQ8NBI3 349 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 OR10AD1Q8NGE0 317 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 CCDC107Q8WV48 283 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 GTF3AQ92664 365 aaKnown RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 SNAPC3Q92966 411 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 DVL3Q92997 716 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-204ENST00000480057 SLAMF9Q96A28 289 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 ST6GAL2Q96JF0 529 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 MED28Q9H204 178 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 CXXC4Q9H2H0 198 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 ING3Q9NXR8 418 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 MTCH1Q9NZJ7 389 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 CEP295Q9C0D2 2601 aa9.4□□□□□ -0.9
VTI1A-204ENST00000480057 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.91
VTI1A-204ENST00000480057 ZFHX4Q86UP3 3567 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 M0QYG6 137 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 TIMM8AO60220 97 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-204ENST00000480057 IGHV3-13P01766 116 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 IFNA6P05013 189 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 FCER2P06734 321 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 AMY2BP19961 511 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 HRH1P35367 487 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 ECI1P42126 302 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 NPBWR2P48146 333 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 ERVK11-1P61568 191 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 FAM27E3Q08E93 113 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 GRK1Q15835 563 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 PIGYQ3MUY2 71 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 FBXL19-AS1Q494R0 122 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 NKAPLQ5M9Q1 402 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 TMEM108Q6UXF1 575 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 Q6ZS49 121 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 SLC36A1Q7Z2H8 476 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 NUP37Q8NFH4 326 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 BEST4Q8NFU0 473 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 OR5AP2Q8NGF4 316 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 OR5H2Q8NGV7 314 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 OR13G1Q8NGZ3 307 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 FAM122AQ96E09 287 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 SCGB3A2Q96PL1 93 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 SLC6A7Q99884 636 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 CMSS1Q9BQ75 279 aaKnown RBP9.39□□□□□ -0.91
VTI1A-204ENST00000480057 TLNRD1Q9H1K6 362 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 SVILO95425 2214 aa9.39□□□□□ -0.91
VTI1A-204ENST00000480057 IGLV3-9A0A075B6K5 115 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 TMEM82A0PJX8 343 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 PYCARD-AS1I3L0S3 204 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 SYNGR1O43759 233 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 CREBL2O60519 120 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 PTBP3O95758 552 aaKnown RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 PGA5P0DJD9 388 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 SULT1A3P0DMM9 295 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 SULT1A4P0DMN0 295 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 PTAFRP25105 342 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 CD40P25942 277 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 CCKARP32238 428 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 PLA2G5P39877 138 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 OR3A3P47888 321 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 EIF2B2P49770 351 aaKnown RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 ASCL1P50553 236 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 SNU13P55769 128 aaKnown RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 CD300CQ08708 224 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 MAB21L1Q13394 359 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 DAZAP2Q15038 168 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 SURF2Q15527 256 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 ST3GAL2Q16842 350 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 MICBQ29980 383 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 ATAD3CQ5T2N8 411 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 SHEQ5VZ18 495 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF626Q68DY1 528 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 OR52W1Q6IF63 320 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 FAHD2BQ6P2I3 314 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-204ENST00000480057 WDR86Q86TI4 376 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 RTN4RL2Q86UN3 420 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 FAM58AQ8N1B3 248 aa9.38□□□□□ -0.91
VTI1A-204ENST00000480057 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms