RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CBY3A6NI87 242 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 NUPR1O60356 82 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 GALNSP34059 522 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 ZNF93P35789 620 aaPredicted RBP18.6■□□□□ 0.57
SDF4-206ENST00000478938 ACTL10Q5JWF8 245 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 CMTM1Q8IZ96 169 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 OR10G4Q8NGN3 311 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 OR4C3Q8NH37 302 aa18.6■□□□□ 0.57
SDF4-206ENST00000478938 GSX1Q9H4S2 264 aaPredicted RBP18.6■□□□□ 0.57
SDF4-206ENST00000478938 ST8SIA3O43173 380 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 DUSP11O75319 330 aaKnown RBP18.59■□□□□ 0.57
SDF4-206ENST00000478938 CTLA4P16410 223 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 OR3A4PP47883 348 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 ZNF266Q14584 549 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 IL13RA2Q14627 380 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 LYG1Q8N1E2 194 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 MRPS28Q9Y2Q9 187 aaKnown RBP18.59■□□□□ 0.57
SDF4-206ENST00000478938 ISG15P05161 165 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 SFTPDP35247 375 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 CST9LP1Q5W188 147 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 PRSS41Q7RTY9 318 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 LINC00346Q8IVM7 164 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 TMEM59Q9BXS4 323 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 NCOR1P1Q9H4R4 102 aa18.59■□□□□ 0.57
SDF4-206ENST00000478938 ZNF205O95201 554 aa18.58■□□□□ 0.57
SDF4-206ENST00000478938 PTPMT1Q8WUK0 201 aaPredicted RBP18.58■□□□□ 0.57
SDF4-206ENST00000478938 DAZLQ92904 295 aaKnown RBP18.58■□□□□ 0.57
SDF4-206ENST00000478938 ZNF524Q96C55 264 aa18.58■□□□□ 0.57
SDF4-206ENST00000478938 OBSL1O75147 1896 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 ZNF878C9JN71 531 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 K7EP13 123 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 B3GALT2O43825 422 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 TRAPPC6AO75865 159 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 IGHEP01854 428 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 CSF2RAP15509 400 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 GALR1P47211 349 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 KLF3P57682 345 aaPredicted RBP18.58■□□□□ 0.56
SDF4-206ENST00000478938 HIST1H3AP68431 136 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 MMDQ15546 238 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 PSRC1Q6PGN9 363 aaPredicted RBP18.58■□□□□ 0.56
SDF4-206ENST00000478938 Q6ZVH6 145 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 TGIF2LYQ8IUE0 185 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 OR51G1Q8NGK1 321 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 C1orf147Q96MC9 270 aaPredicted RBP18.58■□□□□ 0.56
SDF4-206ENST00000478938 ALKBH7Q9BT30 221 aaPredicted RBP18.58■□□□□ 0.56
SDF4-206ENST00000478938 ZNF665Q9H7R5 613 aa18.58■□□□□ 0.56
SDF4-206ENST00000478938 CACNA1IQ9P0X4 2223 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 ONECUT2O95948 504 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 ASGR1P07306 291 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 CSNK1A1P48729 337 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 PIGPP57054 158 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 RIPPLY2Q5TAB7 128 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 ATG4DQ86TL0 474 aaPredicted RBP18.57■□□□□ 0.56
SDF4-206ENST00000478938 STPG4Q8N801 248 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 ZNF701Q9NV72 531 aaPredicted RBP18.57■□□□□ 0.56
SDF4-206ENST00000478938 RNF115Q9Y4L5 304 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 CTSDP07339 412 aaPredicted RBP18.57■□□□□ 0.56
SDF4-206ENST00000478938 SELPP16109 830 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 FAM3BP58499 235 aaPredicted RBP18.57■□□□□ 0.56
SDF4-206ENST00000478938 DMRTC1Q5HYR2 192 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 OR2C3Q8N628 320 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 ARRDC3Q96B67 414 aa18.57■□□□□ 0.56
SDF4-206ENST00000478938 SERINC4A6NH21 518 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 CNN1P51911 297 aaKnown RBP18.56■□□□□ 0.56
SDF4-206ENST00000478938 DPTQ07507 201 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 RTP5Q14D33 572 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 ZNF141Q15928 474 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 ZNF765Q7L2R6 523 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 KLHDC3Q9BQ90 382 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 FBLN5Q9UBX5 448 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 LOC105371242A0A075B767 164 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 IGLV1-36A0A0B4J1U3 117 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 TMEM187Q14656 261 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 LIPHQ8WWY8 451 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 TOMM40LQ969M1 308 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 B3GALT1Q9Y5Z6 326 aa18.56■□□□□ 0.56
SDF4-206ENST00000478938 PRSS37A4D1T9 235 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 PITX3O75364 302 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 DDAH2O95865 285 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 HBE1P02100 147 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 BCL2P10415 239 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 CMPK1P30085 196 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 ZNF41P51814 821 aaPredicted RBP18.55■□□□□ 0.56
SDF4-206ENST00000478938 IL24Q13007 206 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 ACOT6Q3I5F7 207 aaPredicted RBP18.55■□□□□ 0.56
SDF4-206ENST00000478938 SUMF1Q8NBK3 374 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 COX14Q96I36 57 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 LAMA2P24043 3122 aaKnown RBP18.55■□□□□ 0.56
SDF4-206ENST00000478938 DNAH14Q0VDD8 3507 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 HIDE1A8MVS5 230 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 HRKO00198 91 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 TNFSF12O43508 249 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 FOXS1O43638 330 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 PRKNO60260 465 aaPredicted RBP18.55■□□□□ 0.56
SDF4-206ENST00000478938 DUSP1P28562 367 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 CARD18P57730 90 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 GNMTQ14749 295 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 ATP6V1FQ16864 119 aa18.55■□□□□ 0.56
SDF4-206ENST00000478938 NPAS4Q8IUM7 802 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms