RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 DHRS13Q6UX07 377 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 TMEM200AQ86VY9 491 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 POC1AQ8NBT0 407 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 CXorf58Q96LI9 332 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 RNF126Q9BV68 326 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 DNAJB11Q9UBS4 358 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 IGKV1D-8A0A087WSZ0 117 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 CRYM-AS1A6NIL9 109 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 SPRY1O43609 319 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-212ENST00000477970 UCP3P55916 312 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 RBM11P57052 281 aaKnown RBP10.55□□□□□ -0.72
PTPRF-212ENST00000477970 ARPC4P59998 168 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 TUSC5Q8IXB3 177 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 APOBEC3DQ96AK3 386 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-212ENST00000477970 SLC6A15Q9H2J7 730 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 C1orf123Q9NWV4 160 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 C5orf51A6NDU8 294 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 PDCD6O75340 191 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 TNFSF15O95150 251 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 IFNA2P01563 188 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 MEOX1P50221 254 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 PLCXD3Q63HM9 321 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 APH1AQ96BI3 265 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 PIK3IP1Q96FE7 263 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 AQP10Q96PS8 301 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 CMSS1Q9BQ75 279 aaKnown RBP10.55□□□□□ -0.72
PTPRF-212ENST00000477970 HES7Q9BYE0 225 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 WDR13Q9H1Z4 485 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 BARX1Q9HBU1 254 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-212ENST00000477970 ZNF701Q9NV72 531 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-212ENST00000477970 SPDEFO95238 335 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 OR10AD1Q8NGE0 317 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 SULT4A1Q9BR01 284 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 MEMO1Q9Y316 297 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 CSAG2Q9Y5P2 127 aa10.55□□□□□ -0.72
PTPRF-212ENST00000477970 MED12Q93074 2177 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 FAM25EA8MYX2 175 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 EEF1E1-BLOC1S5C9J1V9 151 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-212ENST00000477970 ANGPTL7O43827 346 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 ZNF250P15622 560 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 PTGER4P35408 488 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 PLGLB1Q02325 96 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 BVESQ8NE79 360 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
PTPRF-212ENST00000477970 GALNT14Q96FL9 552 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 CYYR1Q96J86 154 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 ZNF2Q9BSG1 426 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-212ENST00000477970 J3QW42 95 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 F10P00742 488 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 CD46P15529 392 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 GLRA1P23415 457 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 TAF9Q16594 264 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 CCDC157Q569K6 752 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 DMRTC1Q5HYR2 192 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 NKAPLQ5M9Q1 402 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 UNQ6494/PRO21346Q6UXR6 183 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 LRTM2Q8N967 370 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 SLC30A7Q8NEW0 376 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 FAAP24Q9BTP7 215 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 IL17BQ9UHF5 180 aa10.54□□□□□ -0.72
PTPRF-212ENST00000477970 FAM166BA8MTA8 275 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 OR5H8P0DN80 308 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 MALLQ13021 153 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 SLC9A3R2Q15599 337 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 PAN3Q58A45 887 aaKnown RBP10.53□□□□□ -0.72
PTPRF-212ENST00000477970 LINC00596Q86U02 117 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 POM121L2Q96KW2 1035 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 DMRTA2Q96SC8 542 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 TUBD1Q9UJT1 453 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 ZNF175Q9Y473 711 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 SPEGQ15772 3267 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 B8ZZF3 427 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 GEMIN2O14893 280 aaKnown RBP10.53□□□□□ -0.72
PTPRF-212ENST00000477970 PGAM2P15259 253 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 LUMP51884 338 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-212ENST00000477970 PPIAP62937 165 aaKnown RBP10.53□□□□□ -0.72
PTPRF-212ENST00000477970 DAZAP2Q15038 168 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-212ENST00000477970 CEACAM21Q3KPI0 293 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 LRRC37A5PQ49AS3 106 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 SGPP2Q8IWX5 399 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 PIGCQ92535 297 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 SHARPINQ9H0F6 387 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 ZNF286AQ9HBT8 521 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 ST3GAL6Q9Y274 331 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 C13orf42A0A1B0GVH6 325 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 H0YIZ8 118 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 FGF16O43320 207 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 FUT3P21217 361 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 SLC10A1Q14973 349 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 FBXL14Q8N1E6 418 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 OR51F2Q8NH61 342 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 FNDC9Q8TBE3 224 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 MAFIPQ8WZ33 124 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 DCUN1D4Q92564 292 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 HDHD3Q9BSH5 251 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-212ENST00000477970 NARFLQ9H6Q4 476 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 ZDHHC11Q9H8X9 412 aa10.53□□□□□ -0.72
PTPRF-212ENST00000477970 CALHM2Q9HA72 323 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms