RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 C1DQ13901 141 aaKnown RBP3.32□□□□□ -1.88
VPS50-214ENST00000477935 FAM83EQ2M2I3 478 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 SLC36A2Q495M3 483 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 XKR7Q5GH72 579 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 THEM4Q5T1C6 240 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 PDZK1Q5T2W1 519 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 FAM71E1Q6IPT2 247 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 TMEM53Q6P2H8 277 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 LAX1Q8IWV1 398 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 C20orf196Q8IYI0 205 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 PDIK1LQ8N165 341 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 ICA1LQ8NDH6 482 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 FAM71CQ8NEG0 241 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 OR4F6Q8NGB9 312 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 KLF14Q8TD94 323 aaPredicted RBP3.32□□□□□ -1.88
VPS50-214ENST00000477935 GGHQ92820 318 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 CDS1Q92903 461 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 OXGR1Q96P68 337 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 GPR22Q99680 433 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 TM2D3Q9BRN9 247 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 RMND5AQ9H871 391 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 ZNF702PQ9H963 129 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 CAB39LQ9H9S4 337 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 FARSBQ9NSD9 589 aaKnown RBP3.32□□□□□ -1.88
VPS50-214ENST00000477935 IFNKQ9P0W0 207 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 TFR2Q9UP52 801 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 DMBT1Q9UGM3 2413 aaPredicted RBP3.31□□□□□ -1.88
VPS50-214ENST00000477935 DNAH11Q96DT5 4516 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 TMEM72A0PK05 275 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 ZNF726A6NNF4 738 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 FAAHO00519 579 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 SYNGR1O43759 233 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 TBX19O60806 448 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 STX11O75558 287 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 CRCPO75575 148 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 UGT2B17O75795 530 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 CHRNGP07510 517 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 MYCNOSP40205 109 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 SNU13P55769 128 aaKnown RBP3.31□□□□□ -1.88
VPS50-214ENST00000477935 ERVS71-1P61550 626 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 SLC34A1Q06495 639 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 MFGE8Q08431 387 aaPredicted RBP3.31□□□□□ -1.88
VPS50-214ENST00000477935 LASP1Q14847 261 aaKnown RBP3.31□□□□□ -1.88
VPS50-214ENST00000477935 SPHARQ15513 63 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 LY6EQ16553 131 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 LRRC75BQ2VPJ9 315 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 SPRNQ5BIV9 151 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 PHYHD1Q5SRE7 291 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 ARL9Q6T311 187 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 CCDC121Q6ZUS5 278 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 VMO1Q7Z5L0 202 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 SKA3Q8IX90 412 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 PDZD9Q8IXQ8 264 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 TMEM123Q8N131 208 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 ARFGAP2Q8N6H7 521 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 SAMD12Q8N8I0 201 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 OR2Z1Q8NG97 314 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 OR4X2Q8NGF9 303 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 OR51G2Q8NGK0 314 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 MFSD8Q8NHS3 518 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 CDKL2Q92772 493 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 ZNF414Q96IQ9 312 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 TECTBQ96PL2 329 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 OR2M2Q96R28 347 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 OR2V2Q96R30 315 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 SDF2Q99470 211 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 EBPLQ9BY08 206 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 OR51B6Q9H340 312 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 RNPEPL1Q9HAU8 725 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 ZCCHC3Q9NUD5 404 aaKnown RBP3.31□□□□□ -1.88
VPS50-214ENST00000477935 PITPNC1Q9UKF7 332 aa3.31□□□□□ -1.88
VPS50-214ENST00000477935 ZNF256Q9Y2P7 627 aaPredicted RBP3.31□□□□□ -1.88
VPS50-214ENST00000477935 PKHD1P08F94 4074 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 TRAV9-2A0A087WT02 112 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 C13orf42A0A1B0GVH6 325 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 MANBAO00462 879 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 OR2T1O43869 369 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 TIMM8AO60220 97 aaPredicted RBP3.3□□□□□ -1.88
VPS50-214ENST00000477935 OR6A2O95222 327 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 FGGP02679 453 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 CCL2P13500 99 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 GLRA1P23415 457 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 SAA4P35542 130 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 VDAC2P45880 294 aaPredicted RBP3.3□□□□□ -1.88
VPS50-214ENST00000477935 SRP9P49458 86 aaKnown RBP3.3□□□□□ -1.88
VPS50-214ENST00000477935 INSL3P51460 131 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 ARHGDIAP52565 204 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 AQP5P55064 265 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 RPL27P61353 136 aaKnown RBP3.3□□□□□ -1.88
VPS50-214ENST00000477935 IL5RAQ01344 420 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 TIMM50Q3ZCQ8 353 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 NCR3LG1Q68D85 454 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 CYS1Q717R9 158 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 NET1Q7Z628 596 aaPredicted RBP3.3□□□□□ -1.88
VPS50-214ENST00000477935 SLC22A24Q8N4F4 322 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 NATD1Q8N6N6 113 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 CCDC197Q8NCU1 140 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 OR6N1Q8NGY5 312 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms