RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RIMKLAQ8IXN7 391 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 ZNF683Q8IZ20 524 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 WBP1LQ9NX94 342 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 SLC45A2Q9UMX9 530 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 CCKARP32238 428 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 GUK1Q16774 197 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 PWWP2BQ6NUJ5 590 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 YIPF6Q96EC8 236 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 A0A0B4J2E0 115 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 A0A1B0GX12 115 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 EPPINO95925 133 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 ZNF793Q6ZN11 406 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 ANGPTL6Q8NI99 470 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 NEIL1Q96FI4 390 aaPredicted RBP16.53■□□□□ 0.24
VARS2-209ENST00000477288 WASHC3Q9Y3C0 194 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 NXPH1P58417 271 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 SSBP1Q04837 148 aaKnown RBP16.53■□□□□ 0.24
VARS2-209ENST00000477288 RPEL1Q2QD12 228 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 JMJD6Q6NYC1 403 aaPredicted RBP16.53■□□□□ 0.24
VARS2-209ENST00000477288 FAHD1Q6P587 224 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 CDX2Q99626 313 aaPredicted RBP16.53■□□□□ 0.24
VARS2-209ENST00000477288 PRRX2Q99811 253 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 PATE4P0C8F1 98 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 AREGP15514 252 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 SPCS3P61009 180 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 C6orf201Q7Z4U5 140 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 ZNF680Q8NEM1 530 aa16.53■□□□□ 0.24
VARS2-209ENST00000477288 C3orf85A0A1B0GTC6 90 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 HYAL3O43820 417 aaPredicted RBP16.52■□□□□ 0.24
VARS2-209ENST00000477288 IGHA1P01876 353 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 IGHA2P01877 340 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 CAMPP49913 170 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 WDR38Q5JTN6 314 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 SSC5DA1L4H1 1573 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 A0A1B0GTL3 188 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 DHRS3O75911 302 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 CXXC4Q9H2H0 198 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 LHX9Q9NQ69 397 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 THYN1Q9P016 225 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 MMP15P51511 669 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 C3AR1Q16581 482 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 TMEM215Q68D42 235 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 OR52L2PQ8NGH6 319 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 OR4D10Q8NGI6 311 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 RND1Q92730 232 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 SMIM12Q96EX1 92 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 SLC2A9Q9NRM0 540 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 FKBP11Q9NYL4 201 aa16.52■□□□□ 0.24
VARS2-209ENST00000477288 SPNP16150 400 aa16.52■□□□□ 0.23
VARS2-209ENST00000477288 B3GNTL1Q67FW5 361 aaPredicted RBP16.52■□□□□ 0.23
VARS2-209ENST00000477288 TRAT1Q6PIZ9 186 aa16.52■□□□□ 0.23
VARS2-209ENST00000477288 SMIM4Q8WVI0 70 aa16.52■□□□□ 0.23
VARS2-209ENST00000477288 F2RL2O00254 374 aa16.52■□□□□ 0.23
VARS2-209ENST00000477288 NKX2-2O95096 273 aa16.52■□□□□ 0.23
VARS2-209ENST00000477288 FGF8P55075 233 aaPredicted RBP16.52■□□□□ 0.23
VARS2-209ENST00000477288 OR5C1Q8NGR4 320 aa16.52■□□□□ 0.23
VARS2-209ENST00000477288 FCN1O00602 326 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 ADAM11O75078 769 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 KIR2DS2P43631 304 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 OR8B3Q8NGG8 313 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 GPBAR1Q8TDU6 330 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 C4orf45Q96LM5 186 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 OR8B2Q96RD0 313 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 CACNG5Q9UF02 275 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 ZNF737O75373 536 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 LGALS7P47929 136 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 ZNF154Q13106 437 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 ETV3LQ6ZN32 361 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 FAM87AP0C7U9 286 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 CALCRP30988 508 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 MDH2P40926 338 aaKnown RBP16.51■□□□□ 0.23
VARS2-209ENST00000477288 RBPMS2Q6ZRY4 209 aaKnown RBP16.51■□□□□ 0.23
VARS2-209ENST00000477288 TMEM116Q8NCL8 245 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 CSF2RBP32927 897 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 ARRDC1Q8N5I2 433 aa16.51■□□□□ 0.23
VARS2-209ENST00000477288 SIRT3Q9NTG7 399 aaPredicted RBP16.51■□□□□ 0.23
VARS2-209ENST00000477288 ACTL6AO96019 429 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 CSN3P07498 182 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 SRD5A2P31213 254 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 PRSS12P56730 875 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 CEBPEQ15744 281 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 PRICKLE4Q2TBC4 344 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 APOBEC4Q8WW27 367 aaKnown RBP16.5■□□□□ 0.23
VARS2-209ENST00000477288 RASL12Q9NYN1 266 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 C5orf52A6NGY3 159 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 OR2T8A6NH00 312 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 WNT1P04628 370 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 RSRP1Q9BUV0 290 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 TOLLIPQ9H0E2 274 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 DNAJB12Q9NXW2 375 aaKnown RBP16.5■□□□□ 0.23
VARS2-209ENST00000477288 MAP1LC3B2A6NCE7 125 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 TTRP02766 147 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 PTGFRP43088 359 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 ZNF141Q15928 474 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 RNF212Q495C1 297 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 FDX2Q6P4F2 183 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 TSPAN32Q96QS1 320 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 MAP1LC3BQ9GZQ8 125 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 LOC102724200A0A096LPH7 203 aaPredicted RBP16.5■□□□□ 0.23
VARS2-209ENST00000477288 FAM24AA6NFZ4 105 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms