RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 IL36RNQ9UBH0 155 aa24.46■■□□□ 1.51
VEGFA-211ENST00000476772 MTFP1Q9UDX5 166 aa24.46■■□□□ 1.51
VEGFA-211ENST00000476772 A0A1B0GVG6 124 aa24.45■■□□□ 1.5
VEGFA-211ENST00000476772 C3orf80F5H4A9 247 aa24.45■■□□□ 1.5
VEGFA-211ENST00000476772 LPLP06858 475 aa24.45■■□□□ 1.5
VEGFA-211ENST00000476772 GSTP1P09211 210 aaKnown RBP24.45■■□□□ 1.5
VEGFA-211ENST00000476772 ZNF81P51508 661 aa24.45■■□□□ 1.5
VEGFA-211ENST00000476772 MPPED2Q15777 294 aa24.45■■□□□ 1.5
VEGFA-211ENST00000476772 PECRQ9BY49 303 aa24.45■■□□□ 1.5
VEGFA-211ENST00000476772 A6NLC8 198 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 RBBP9O75884 186 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 PRKACAP17612 351 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 LOXP28300 417 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-211ENST00000476772 KLF9Q13886 244 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-211ENST00000476772 DAZAP2Q15038 168 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-211ENST00000476772 NKAPLQ5M9Q1 402 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 ZNF826PQ6ZT77 177 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 GDPD3Q7L5L3 318 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 NUDCD2Q8WVJ2 157 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 PIK3IP1Q96FE7 263 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 UFSP2Q9NUQ7 469 aa24.44■■□□□ 1.5
VEGFA-211ENST00000476772 ANKHD1Q8IWZ3 2542 aaKnown RBP24.44■■□□□ 1.5
VEGFA-211ENST00000476772 VSTM5A8MXK1 200 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 LYRM1O43325 122 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 PGA5P0DJD9 388 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 RFX2P48378 723 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 PDCD1Q15116 288 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 C6orf201Q7Z4U5 140 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 EMG1Q92979 244 aaKnown RBP24.43■■□□□ 1.5
VEGFA-211ENST00000476772 SPNP16150 400 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 NHLRC3Q5JS37 347 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 FAM58AQ8N1B3 248 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 MINDY2Q8NBR6 621 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 OR2V2Q96R30 315 aa24.43■■□□□ 1.5
VEGFA-211ENST00000476772 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.43■■□□□ 1.5
VEGFA-211ENST00000476772 IGHV1-46P01743 117 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 FCER2P06734 321 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 SERPINF1P36955 418 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 KIR2DL3P43628 341 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 ERVK11-1P61568 191 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 SPRNQ5BIV9 151 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 NRARPQ7Z6K4 114 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 ST8SIA4Q92187 359 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 MEGF10Q96KG7 1140 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 COX4I2Q96KJ9 171 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 NRIP2Q9BQI9 281 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 PLEKHJ1Q9NW61 149 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 CACNG2Q9Y698 323 aa24.42■■□□□ 1.5
VEGFA-211ENST00000476772 ANKRD20A5PA0PJZ0 165 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 C19orf84I3L1E1 186 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 PTBP3O95758 552 aaKnown RBP24.41■■□□□ 1.5
VEGFA-211ENST00000476772 CHATP28329 748 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 GNG2P59768 71 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 PNLIPRP3Q17RR3 467 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 WDR82Q6UXN9 313 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 TRAPPC6BQ86SZ2 158 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 LILRB1Q8NHL6 650 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-211ENST00000476772 RHOFQ9HBH0 211 aa24.41■■□□□ 1.5
VEGFA-211ENST00000476772 SSX5O60225 188 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 OR7C1O76099 320 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-211ENST00000476772 ECDO95905 644 aaPredicted RBP24.4■■□□□ 1.5
VEGFA-211ENST00000476772 GSTT2BP0CG30 244 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 PCGF3Q3KNV8 242 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 Q8IYB0 196 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 POC1AQ8NBT0 407 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 POM121Q96HA1 1249 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 NEDD4LQ96PU5 975 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 TMEM204Q9BSN7 226 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 HSF4Q9ULV5 492 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 ICE1Q9Y2F5 2266 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A10PA6NDY2 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A18PA6NE21 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A16PA6NEW6 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A20PA6NIJ5 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A8PA6NJQ4 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A7PA6NKC0 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A22PA8MWA6 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A12PA8MX19 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A5PA8MXJ8 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A23PA8MXZ1 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A15PP0C7V4 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A13PP0C7W8 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A14PP0C7W9 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 FAM90A24PP0C7X0 464 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 GMFBP60983 142 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 Q6ZNX1 250 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 ITLN1Q8WWA0 313 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 C1orf123Q9NWV4 160 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 CISD1Q9NZ45 108 aaKnown RBP24.4■■□□□ 1.5
VEGFA-211ENST00000476772 ZDHHC8Q9ULC8 765 aa24.4■■□□□ 1.5
VEGFA-211ENST00000476772 CHD3Q12873 2000 aaKnown RBP24.39■■□□□ 1.5
VEGFA-211ENST00000476772 SPTBN1Q01082 2364 aaKnown RBP24.39■■□□□ 1.5
VEGFA-211ENST00000476772 ACAA1P09110 424 aaPredicted RBP24.39■■□□□ 1.49
VEGFA-211ENST00000476772 DUSP1P28562 367 aa24.39■■□□□ 1.49
VEGFA-211ENST00000476772 APOBEC3AP31941 199 aaPredicted RBP24.39■■□□□ 1.49
VEGFA-211ENST00000476772 AP3S2P59780 193 aa24.39■■□□□ 1.49
VEGFA-211ENST00000476772 ACTBP60709 375 aa24.39■■□□□ 1.49
VEGFA-211ENST00000476772 ACTG1P63261 375 aa24.39■■□□□ 1.49
VEGFA-211ENST00000476772 SSBP1Q04837 148 aaKnown RBP24.39■■□□□ 1.49
VEGFA-211ENST00000476772 DYRK1AQ13627 763 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms