RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 THADAQ6YHU6 1953 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 OR2AT4A6NND4 320 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 MFNGO00587 321 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 CNMDO75829 334 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 IGHV1-46P01743 117 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 MPIP34949 423 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 RANBP1P43487 201 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 KCNJ3P48549 501 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 RBX1P62877 108 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 ATP5G2Q06055 141 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 TRDNQ13061 729 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 ZNF404Q494X3 552 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 PRR9Q5T870 116 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 Q6ZT83 130 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 FAM231DQ6ZW35 169 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 COPS6Q7L5N1 327 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 OR51Q1Q8NH59 317 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 ZNF396Q96N95 335 aaPredicted RBP3.16□□□□□ -1.9
VPS50-212ENST00000476413 RDH14Q9HBH5 336 aa3.16□□□□□ -1.9
VPS50-212ENST00000476413 STX18Q9P2W9 335 aaKnown RBP3.16□□□□□ -1.9
VPS50-212ENST00000476413 TCAPO15273 167 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 RLN2P04090 185 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 TAC1P20366 129 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 SLC18A1P54219 525 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 STX4Q12846 297 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 TMED1Q13445 227 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 DAZ4Q86SG3 579 aaKnown RBP3.15□□□□□ -1.91
VPS50-212ENST00000476413 LRRC8AQ8IWT6 810 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 SPICQ8N5J4 248 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 OR2Y1Q8NGV0 311 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 YIPF6Q96EC8 236 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 DAZ1Q9NQZ3 744 aaKnown RBP3.15□□□□□ -1.91
VPS50-212ENST00000476413 NLE1Q9NVX2 485 aaPredicted RBP3.15□□□□□ -1.91
VPS50-212ENST00000476413 MAT2BQ9NZL9 334 aa3.15□□□□□ -1.91
VPS50-212ENST00000476413 KIR2DS1A0A191URI9 304 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 A0A1B0GXF2 115 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 ZNF233A6NK53 670 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 FFAR1O14842 300 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 SHOX2O60902 331 aaPredicted RBP3.14□□□□□ -1.91
VPS50-212ENST00000476413 OR2A4O95047 310 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 OR5AC1P0C628 307 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 M6PRP20645 277 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 IGFBP7Q16270 282 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 CASP12Q6UXS9 341 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 NT5DC3Q86UY8 548 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 ZFP62Q8NB50 900 aaPredicted RBP3.14□□□□□ -1.91
VPS50-212ENST00000476413 CLHC1Q8NHS4 586 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 UBA3Q8TBC4 463 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 OR5P2Q8WZ92 322 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 OR2M4Q96R27 311 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 OR2A7Q96R45 310 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 NXF2Q9GZY0 626 aaKnown RBP3.14□□□□□ -1.91
VPS50-212ENST00000476413 FAM60AQ9NP50 221 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 PARP11Q9NR21 331 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 TMEM38BQ9NVV0 291 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 INSIG2Q9Y5U4 225 aa3.14□□□□□ -1.91
VPS50-212ENST00000476413 LOC389332A0A1B0GUA5 103 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 IZUMO1RA6ND01 250 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 K7ERQ8 282 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 CDIPTO14735 213 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 YKT6O15498 198 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 BRI3O95415 125 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 DSTNP60981 165 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 VSNL1P62760 191 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 ELOCQ15369 112 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 Q499Y3 187 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 CLEC12AQ5QGZ9 265 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 FAM131AQ6UXB0 335 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 CLEC18BQ6UXF7 455 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 TMEM25Q86YD3 366 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 ZDHHC22Q8N966 263 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 OR2AE1Q8NHA4 323 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 TMEM239Q8WW34 195 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 CCL17Q92583 94 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 CFAP53Q96M91 514 aa3.13□□□□□ -1.91
VPS50-212ENST00000476413 API5Q9BZZ5 524 aaKnown RBP3.13□□□□□ -1.91
VPS50-212ENST00000476413 RBM22Q9NW64 420 aaKnown RBP eCLIP3.13□□□□□ -1.91
VPS50-212ENST00000476413 NOTCH2Q04721 2471 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 RBFOX3A6NFN3 312 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 F8VP50 259 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 PLPP3O14495 311 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 FSTL3O95633 263 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 SNRPAP09012 282 aaKnown RBP3.12□□□□□ -1.91
VPS50-212ENST00000476413 RAB38P57729 211 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 UBE2KP61086 200 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 STX3Q13277 289 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 UGT2A3Q6UWM9 527 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 TMEM136Q6ZRR5 245 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 TPGS1Q6ZTW0 290 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 TRMT10CQ7L0Y3 403 aaKnown RBP3.12□□□□□ -1.91
VPS50-212ENST00000476413 DRAXINQ8NBI3 349 aaPredicted RBP3.12□□□□□ -1.91
VPS50-212ENST00000476413 ITLN2Q8WWU7 325 aaPredicted RBP3.12□□□□□ -1.91
VPS50-212ENST00000476413 C22orf15Q8WYQ4 148 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 FMC1Q96HJ9 113 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 ZBED3Q96IU2 234 aaPredicted RBP3.12□□□□□ -1.91
VPS50-212ENST00000476413 ABCB9Q9NP78 766 aa3.12□□□□□ -1.91
VPS50-212ENST00000476413 VWA8A3KMH1 1905 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms