RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NEK6Q9HC98 313 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 FGF20Q9NP95 211 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-205ENST00000476387 MAB21L2Q9Y586 359 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 DSCAML1Q8TD84 2053 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 IGKV1-27A0A075B6S5 117 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 KNG1P01042 644 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 ATF1P18846 271 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 MYL12AP19105 171 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 AZGP1P25311 298 aaKnown RBP13.3□□□□□ -0.28
COL1A1-205ENST00000476387 CEBPDP49716 269 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-205ENST00000476387 RAG2P55895 527 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 MTCP1P56278 107 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 IL18R1Q13478 541 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 OGFRL1Q5TC84 451 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-205ENST00000476387 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
COL1A1-205ENST00000476387 TMPRSS11AQ6ZMR5 421 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 PDZD9Q8IXQ8 264 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 Q8IYB0 196 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 FAM185AQ8N0U4 392 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 OR51A4Q8NGJ6 313 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 OR5AK2Q8NH90 309 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 TBC1D15Q8TC07 691 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 TSEN15Q8WW01 171 aaKnown RBP13.3□□□□□ -0.28
COL1A1-205ENST00000476387 TAF15Q92804 592 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL1A1-205ENST00000476387 OPALINQ96PE5 141 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 JAM3Q9BX67 310 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 CHIAQ9BZP6 476 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 BEX1Q9HBH7 125 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 SIRT7Q9NRC8 400 aa13.3□□□□□ -0.28
COL1A1-205ENST00000476387 TRBV2A0A0J9YWF9 115 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 M0R1W7 72 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 CASQ2O14958 399 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 INMTO95050 263 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 LIMS3P0CW19 117 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 LIMS4P0CW20 117 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 OMGP23515 440 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 CAPGP40121 348 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 ERVK11-1P61568 191 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 ADARB1P78563 741 aaKnown RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 GUCA2AQ02747 115 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 MED21Q13503 144 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 METAP1DQ6UB28 335 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 LDLRAD3Q86YD5 345 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 MKXQ8IYA7 352 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 C8orf59Q8N0T1 100 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 CD177Q8N6Q3 437 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 ASCC1Q8N9N2 400 aaKnown RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 OR13C9Q8NGT0 318 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 EMG1Q92979 244 aaKnown RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 ZNF649Q9BS31 505 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 DCLRE1BQ9H816 532 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 MTCH1Q9NZJ7 389 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 C1RLQ9NZP8 487 aa13.29□□□□□ -0.28
COL1A1-205ENST00000476387 CAB39Q9Y376 341 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 EXOSC1Q9Y3B2 195 aaKnown RBP13.29□□□□□ -0.28
COL1A1-205ENST00000476387 IGKV1-9A0A0C4DH69 117 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 A0A1W2PPH5 198 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 E9PI62 339 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 WIPF1O43516 503 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 ZFPL1O95159 310 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 EEF1B2P24534 225 aaKnown RBP13.28□□□□□ -0.28
COL1A1-205ENST00000476387 RPL31P62899 125 aaKnown RBP13.28□□□□□ -0.28
COL1A1-205ENST00000476387 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-205ENST00000476387 DYRK2Q92630 601 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 PDCD1LG2Q9BQ51 273 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 ZCCHC4Q9H5U6 513 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 METTL8Q9H825 291 aaKnown RBP13.28□□□□□ -0.28
COL1A1-205ENST00000476387 TNFRSF19Q9NS68 423 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 CHCHD3Q9NX63 227 aaKnown RBP13.28□□□□□ -0.28
COL1A1-205ENST00000476387 DIMT1Q9UNQ2 313 aaKnown RBP13.28□□□□□ -0.28
COL1A1-205ENST00000476387 DHDHQ9UQ10 334 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 HSPE1-MOB4S4R3N1 261 aa13.28□□□□□ -0.28
COL1A1-205ENST00000476387 H0YAE9 185 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 HCKP08631 526 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 IER3P46695 156 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 ETV1P50549 477 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 RELBQ01201 579 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 COL10A1Q03692 680 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 OLFML2AQ68BL7 652 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 NCR3LG1Q68D85 454 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 TREML4Q6UXN2 200 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 C1orf122Q6ZSJ8 110 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 SERPINA12Q8IW75 414 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 Q8N7P7 452 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 OR5D14Q8NGL3 314 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 WFDC12Q8WWY7 111 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 RFT1Q96AA3 541 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 FAM234AQ9H0X4 552 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 C19orf12Q9NSK7 152 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 FAM96BQ9Y3D0 163 aa13.27□□□□□ -0.29
COL1A1-205ENST00000476387 A0A0U1RQK1 487 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 CLPSL1A2RUU4 121 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 F8VVB4 439 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 F8VWA3 439 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 MT-ND2P03891 347 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 TK1P04183 234 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 CHRM2P08172 466 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 GTF2A1P52655 376 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-205ENST00000476387 KLRD1Q13241 179 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms