RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 FAM90A5PA8MXJ8 464 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 FAM90A23PA8MXZ1 464 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 LY6HO94772 140 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 CYB5R3P00387 301 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-224ENST00000475524 IGHV2-70P01814 119 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 FAM90A15PP0C7V4 464 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 FAM90A13PP0C7W8 464 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 FAM90A14PP0C7W9 464 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 FAM90A24PP0C7X0 464 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-224ENST00000475524 RAB6AP20340 208 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 BCL3P20749 454 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 MDH2P40926 338 aaKnown RBP12.72□□□□□ -0.37
MCF2L-224ENST00000475524 QRFPP83859 136 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 ZNF146Q15072 292 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 MICBQ29980 383 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 HES5Q5TA89 166 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 ZNF525Q8N782 197 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 C10orf105Q8TEF2 133 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 FAM168AQ92567 244 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 EMG1Q92979 244 aaKnown RBP12.72□□□□□ -0.37
MCF2L-224ENST00000475524 PIMREGQ9BSJ6 248 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 NLKQ9UBE8 527 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 DAPK2Q9UIK4 370 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 SPG11Q96JI7 2443 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 ABCA12Q86UK0 2595 aa12.72□□□□□ -0.37
MCF2L-224ENST00000475524 VWC2LB2RUY7 222 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 SFTPBP07988 381 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 VSIG8P0DPA2 414 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 SLC25A16P16260 332 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 EGR1P18146 543 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 GPR6P46095 362 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-224ENST00000475524 NPBWR2P48146 333 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 MPV17LQ2QL34 196 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 C2orf76Q3KRA6 126 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 ZNF404Q494X3 552 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 SLC22A6Q4U2R8 563 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 ATPAF1Q5TC12 328 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-224ENST00000475524 FOXB2Q5VYV0 432 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 LRRC28Q86X40 367 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-224ENST00000475524 OSR2Q8N2R0 312 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 OR51D1Q8NGF3 324 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 CMTM3Q96MX0 182 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 BARHL1Q9BZE3 327 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 IFT22Q9H7X7 185 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 ELL3Q9HB65 397 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-224ENST00000475524 RBFOX1Q9NWB1 397 aaKnown RBP12.71□□□□□ -0.37
MCF2L-224ENST00000475524 DNAJB11Q9UBS4 358 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 GLS2Q9UI32 602 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 RAB22AQ9UL26 194 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 SPATA2Q9UM82 520 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 WIPI2Q9Y4P8 454 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.37
MCF2L-224ENST00000475524 ARID1AO14497 2285 aa12.71□□□□□ -0.38
MCF2L-224ENST00000475524 ASH1LQ9NR48 2969 aaKnown RBP12.7□□□□□ -0.38
MCF2L-224ENST00000475524 LYNX1G3V0Z9 82 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 PPIHO43447 177 aaKnown RBP12.7□□□□□ -0.38
MCF2L-224ENST00000475524 SCGNO76038 276 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 HTR3BO95264 441 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 LYNX1P0DP58 116 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 SLC2A2P11168 524 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-224ENST00000475524 MGMTP16455 207 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 SERPINA2P20848 420 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 CAV3P56539 151 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
MCF2L-224ENST00000475524 ZMYND11Q15326 602 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 P2RY14Q15391 338 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 IDNKQ5T6J7 187 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 STUMQ69YW2 141 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 MZT2AQ6P582 158 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 DCDC5Q6ZRR9 648 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 SPICQ8N5J4 248 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 CHST4Q8NCG5 386 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 Q96M66 194 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 NKX3-1Q99801 234 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-224ENST00000475524 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
MCF2L-224ENST00000475524 TM2D1Q9BX74 207 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 WDR13Q9H1Z4 485 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 DCAF16Q9NXF7 216 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 TREM2Q9NZC2 230 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 KAAG1Q9UBP8 84 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 OR5V1Q9UGF6 321 aa12.7□□□□□ -0.38
MCF2L-224ENST00000475524 TACC2O95359 2948 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 A0A075B6Q4 140 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 SMIM30A4D0T7 59 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 OR2AT4A6NND4 320 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 F8VVB4 439 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 F8VWA3 439 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 TNFRSF13BO14836 293 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-224ENST00000475524 WNT9BO14905 357 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 PRKACAP17612 351 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 CD80P33681 288 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 NR4A2P43354 598 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 CLDN12P56749 244 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 RPS27AP62979 156 aaKnown RBP12.69□□□□□ -0.38
MCF2L-224ENST00000475524 UNC119Q13432 240 aa12.69□□□□□ -0.38
MCF2L-224ENST00000475524 CLEC12BQ2HXU8 276 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms