RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 ZNF676Q8N7Q3 588 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 OR5A2Q8NGI9 324 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 OR14K1Q8NGZ2 314 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 HAVCR2Q8TDQ0 301 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 TLNRD1Q9H1K6 362 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 FGF20Q9NP95 211 aaPredicted RBP11.47□□□□□ -0.57
ATG9A-220ENST00000475339 ZNRD1Q9P1U0 126 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 SLC7A11Q9UPY5 501 aa11.47□□□□□ -0.57
ATG9A-220ENST00000475339 EFCAB10A6NFE3 127 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 FBXO24O75426 580 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 SERPINA3P01011 423 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 CCDC159P0C7I6 412 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 OCM2P0CE71 109 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.57
ATG9A-220ENST00000475339 CCR9P51686 369 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 AQP4P55087 323 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 GMFBP60983 142 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 HOXA4Q00056 320 aaPredicted RBP11.46□□□□□ -0.57
ATG9A-220ENST00000475339 ALKBH1Q13686 389 aaKnown RBP11.46□□□□□ -0.57
ATG9A-220ENST00000475339 MICBQ29980 383 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 METTL11BQ5VVY1 283 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 FDX2Q6P4F2 183 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 KRT74Q7RTS7 529 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 EGFL6Q8IUX8 553 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 RDH10Q8IZV5 341 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 OR2T6Q8NHC8 308 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 NRG4Q8WWG1 115 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 TFAP2CQ92754 450 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 JAM3Q9BX67 310 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 FGF23Q9GZV9 251 aaPredicted RBP11.46□□□□□ -0.57
ATG9A-220ENST00000475339 COMMD4Q9H0A8 199 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 ISG20L2Q9H9L3 353 aaKnown RBP11.46□□□□□ -0.57
ATG9A-220ENST00000475339 FRRS1LQ9P0K9 344 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 DNAJB11Q9UBS4 358 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 EXOSC1Q9Y3B2 195 aaKnown RBP11.46□□□□□ -0.57
ATG9A-220ENST00000475339 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.57
ATG9A-220ENST00000475339 IGHV3OR15-7A0A075B7D8 119 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 H0YJX3 145 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 ADAM20O43506 726 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 NDUFA2O43678 99 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 GYPAP02724 150 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 LIPFP07098 398 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 RPSAP08865 295 aaKnown RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 FBP1P09467 338 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 MUC1P15941 1255 aaPredicted RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 HOXD3P31249 432 aaPredicted RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 NANOS3P60323 173 aaKnown RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 HAGHLQ6PII5 290 aaPredicted RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 ZNF573Q86YE8 665 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 C11orf53Q8IXP5 236 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 OR13C3Q8NGS6 347 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 OR10Z1Q8NGY1 313 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 ZNF671Q8TAW3 534 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 PP6455Q8WZ26 134 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 C10orf35Q96D05 121 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 TMEM80Q96HE8 168 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 TECTBQ96PL2 329 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 CITED2Q99967 270 aaPredicted RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 CHST5Q9GZS9 411 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 SIRPDQ9H106 197 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 OR51I2Q9H344 312 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 ERVK-18Q9QC07 812 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 RPUSD1Q9UJJ7 312 aaKnown RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 HHLA2Q9UM44 414 aa11.45□□□□□ -0.58
ATG9A-220ENST00000475339 DIMT1Q9UNQ2 313 aaKnown RBP11.45□□□□□ -0.58
ATG9A-220ENST00000475339 PCLOQ9Y6V0 5065 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 DNAH7Q8WXX0 4024 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 FAM230AA0A1W2PPH8 454 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 NKX6-3A6NJ46 265 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 TMEM212A6NML5 194 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 AKR7A2O43488 359 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 LHBP01229 141 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 ISG15P05161 165 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 LIMS3P0CW19 117 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 LIMS4P0CW20 117 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 PIPP12273 146 aaPredicted RBP11.44□□□□□ -0.58
ATG9A-220ENST00000475339 HAAOP46952 286 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 HSPA13P48723 471 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 ETV1P50549 477 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 CNN3Q15417 329 aaKnown RBP11.44□□□□□ -0.58
ATG9A-220ENST00000475339 FAM76BQ5HYJ3 339 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 TMEM42Q69YG0 159 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 IZUMO2Q6UXV1 221 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 Q6ZSR3 168 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 STX19Q8N4C7 294 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 BPIFB6Q8NFQ5 453 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 OR4C13Q8NGP0 309 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 TRMT10AQ8TBZ6 339 aaKnown RBP11.44□□□□□ -0.58
ATG9A-220ENST00000475339 NPRL2Q8WTW4 380 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 CNOT2Q9NZN8 540 aaKnown RBP11.44□□□□□ -0.58
ATG9A-220ENST00000475339 POLDIP2Q9Y2S7 368 aa11.44□□□□□ -0.58
ATG9A-220ENST00000475339 CAB39Q9Y376 341 aaPredicted RBP11.44□□□□□ -0.58
ATG9A-220ENST00000475339 TRBV2A0A0J9YWF9 115 aa11.43□□□□□ -0.58
ATG9A-220ENST00000475339 PQLC2LA1A4F0 135 aa11.43□□□□□ -0.58
ATG9A-220ENST00000475339 OR4C45A6NMZ5 311 aa11.43□□□□□ -0.58
ATG9A-220ENST00000475339 J3QT63 122 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms