RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 OR8H2Q8N162 312 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 CD177Q8N6Q3 437 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 C11orf65Q8NCR3 313 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 OR8H1Q8NGG4 311 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 OR51A7Q8NH64 312 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 TRMT10AQ8TBZ6 339 aaKnown RBP6.12□□□□□ -1.43
USP54-211ENST00000474929 SLC26A7Q8TE54 656 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 C2CD4CQ8TF44 421 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 LZICQ8WZA0 190 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 ITFG2Q969R8 447 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 REEP6Q96HR9 211 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 OR8B4Q96RC9 309 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 SRD5A3Q9H8P0 318 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 SLC25A19Q9HC21 320 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 KRT84Q9NSB2 600 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 HAO1Q9UJM8 370 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 UBE2J1Q9Y385 318 aaPredicted RBP6.12□□□□□ -1.43
USP54-211ENST00000474929 ADAM18Q9Y3Q7 739 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 GMEB1Q9Y692 573 aa6.12□□□□□ -1.43
USP54-211ENST00000474929 DSCAML1Q8TD84 2053 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 FAM183AA6NL82 134 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 NCBP2LA6PVI3 153 aaKnown RBP6.11□□□□□ -1.43
USP54-211ENST00000474929 EFCAB9A8MZ26 197 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 EVPLLA8MZ36 301 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 HMGB1P1B2RPK0 211 aaPredicted RBP6.11□□□□□ -1.43
USP54-211ENST00000474929 DLGAP1O14490 977 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 RTL8CO15255 209 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 TBX1O43435 398 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 TFAP2AP05549 437 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 ZP3P21754 424 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 SLC15A1P46059 708 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 GSK3AP49840 483 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 ST3GAL3Q11203 375 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 KPNB1Q14974 876 aaKnown RBP6.11□□□□□ -1.43
USP54-211ENST00000474929 TAF13Q15543 124 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 OTPQ5XKR4 325 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 TRAPPC6BQ86SZ2 158 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 HAPLN4Q86UW8 402 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 TIGD4Q8IY51 512 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 GPR32P1Q8NGA4 272 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 OR5B12Q96R08 314 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 OR52B2Q96RD2 323 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 KCNJ15Q99712 375 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 RASL11BQ9BPW5 248 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 OVOL2Q9BRP0 275 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 TOLLIPQ9H0E2 274 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 INTS9Q9NV88 658 aaKnown RBP6.11□□□□□ -1.43
USP54-211ENST00000474929 ETAA1Q9NY74 926 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 ZIM2Q9NZV7 527 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 COPS3Q9UNS2 423 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 SLC22A13Q9Y226 551 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 PIGLQ9Y2B2 252 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 RHBDD3Q9Y3P4 386 aa6.11□□□□□ -1.43
USP54-211ENST00000474929 DNAH17Q9UFH2 4485 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 PKD1P98161 4303 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 ZNF878C9JN71 531 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 NXPH2O95156 264 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 IGKV1D-33P01593 117 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 IGKV1-33P01594 117 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 HLA-DQA2P01906 255 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 HSPB1P04792 205 aaKnown RBP6.1□□□□□ -1.43
USP54-211ENST00000474929 RBMY1CP0DJD4 496 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 SOX6P35712 828 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 IDH3AP50213 366 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 GPM6AP51674 278 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 RPS6KA3P51812 740 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 GRB2P62993 217 aaKnown RBP6.1□□□□□ -1.43
USP54-211ENST00000474929 RAB40BQ12829 278 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 SF3A3Q12874 501 aaKnown RBP eCLIP6.1□□□□□ -1.43
USP54-211ENST00000474929 GALEQ14376 348 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 EPGNQ6UW88 154 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 HEPN1Q6WQI6 88 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 RBM45Q8IUH3 476 aaKnown RBP6.1□□□□□ -1.43
USP54-211ENST00000474929 HPSE2Q8WWQ2 592 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 AQP3Q92482 292 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 GPX7Q96SL4 187 aaPredicted RBP6.1□□□□□ -1.43
USP54-211ENST00000474929 NEURL2Q9BR09 285 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 GGTLC1Q9BX51 225 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 OR10A2Q9H208 303 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 OR51I2Q9H344 312 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 FN3KQ9H479 309 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 IKZF5Q9H5V7 419 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 ZNF446Q9NWS9 450 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 OR6C3Q9NZP0 311 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 RIMS3Q9UJD0 308 aa6.1□□□□□ -1.43
USP54-211ENST00000474929 IGHV4OR15-8A0A075B7B6 117 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 A0A087WW49 117 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 A0A087X0M5 115 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 TRGV10A0A0A0MS01 117 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 A0A1B0GX30 115 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 FUOMA2VDF0 154 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 LY6LH3BQJ8 138 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 UBDO15205 165 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 NOS1APO75052 506 aaPredicted RBP6.09□□□□□ -1.43
USP54-211ENST00000474929 NDUFB2O95178 105 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 RENP00797 406 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
USP54-211ENST00000474929 ANXA2P07355 339 aaKnown RBP6.09□□□□□ -1.43
USP54-211ENST00000474929 PEX2P28328 305 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms