RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 DAPP1Q9UN19 280 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 LRP12Q9Y561 859 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 TIMM9Q9Y5J7 89 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 RFNGQ9Y644 331 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 LHFPL6Q9Y693 200 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 IGLV3-32A0A0A0MS00 114 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 LOC102725191A0A1B0GVB3 256 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 A0A1W2PPK0 400 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 TMEM189A5PLL7 270 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 MEGF11A6BM72 1044 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 DHRS7CA6NNS2 312 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 NARSO43776 548 aaKnown RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 TBL1XO60907 577 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 DUSP11O75319 330 aaKnown RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 PDGFBP01127 241 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 HLA-DRB1P01911 266 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 AMY2AP04746 511 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 PCCBP05166 539 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 LINC00869P0C866 280 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 CPMP14384 443 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 FCGR2CP31995 323 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 CA7P43166 264 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 UBE2V1Q13404 147 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 ZNHIT3Q15649 155 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 ZNF77Q15935 545 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 TBR1Q16650 682 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 ABHD17BQ5VST6 288 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 CLEC9AQ6UXN8 241 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 PARS2Q7L3T8 475 aaKnown RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 CYB561D1Q8N8Q1 229 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 CDRT4Q8N9R6 151 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 OR2L3Q8NG85 312 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 RNASE11Q8TAA1 199 aaKnown RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 FAM216AQ8WUB2 273 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 PTPMT1Q8WUK0 201 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 FAM122AQ96E09 287 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 ADAT3Q96EY9 351 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 TBX5Q99593 518 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 ZNF2Q9BSG1 426 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 NICN1Q9BSH3 213 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 TRIM2Q9C040 744 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 OR2J1Q9GZK6 312 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 ZNF703Q9H7S9 590 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 TBX21Q9UL17 535 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 B9D1Q9UPM9 204 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 MRPS2Q9Y399 296 aaKnown RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 IER3IP1Q9Y5U9 82 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 SVEP1Q4LDE5 3571 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 TMEM235A6NFC5 223 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 AHRRA9YTQ3 701 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 B3GAT3O94766 335 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 HPNP05981 417 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 PGA3P0DJD8 388 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 GNB3P16520 340 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 KLK2P20151 261 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 AADACP22760 399 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 DTYMKP23919 212 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 PBLDP30039 288 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 CEACAM8P31997 349 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 MPLP40238 635 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 SLC11A1P49279 550 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 GNG10P50151 68 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 HLA-DRB3P79483 266 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 BAXQ07812 192 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 ZNF585AQ6P3V2 769 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 SULF2Q8IWU5 870 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 HLA-CQ95604 372 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 SPSB1Q96BD6 273 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 MOB3AQ96BX8 217 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 RITA1Q96K30 269 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 Q96M66 194 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 SFXN3Q9BWM7 321 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 MCTS1Q9ULC4 181 aaKnown RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 SLC22A13Q9Y226 551 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 COX11Q9Y6N1 276 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 LY96Q9Y6Y9 160 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 IGKV3D-11A0A0A0MRZ8 115 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 FAM221AA4D161 298 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 TMEM250H0YL14 139 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 PPP1R2P9O14990 202 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 GMFGO60234 142 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 CDS2O95674 445 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 IFNA21P01568 189 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 PET100P0DJ07 73 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 IGLC2P0DOY2 106 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 IGLC3P0DOY3 106 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 GRPRP30550 384 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 RPL23P62829 140 aaKnown RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 H3F3AP84243 136 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 EWSR1Q01844 656 aaKnown RBP eCLIP3.53□□□□□ -1.84
USP16-205ENST00000474835 PAX8Q06710 450 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 IL24Q13007 206 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 TAF13Q15543 124 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 ADAM5Q6NVV9 412 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 Q6ZVL8 140 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 TRAPPC6BQ86SZ2 158 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 NIT1Q86X76 327 aa3.53□□□□□ -1.84
USP16-205ENST00000474835 LRRC25Q8N386 305 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 FAM160A2Q8N612 972 aaPredicted RBP3.53□□□□□ -1.84
USP16-205ENST00000474835 BOLLQ8N9W6 283 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms