RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PAHP00439 452 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 LHBP01229 141 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 GTF2A1P52655 376 aaPredicted RBP12.49□□□□□ -0.41
VARS-223ENST00000474643 TAS2R43P59537 309 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 FAM76BQ5HYJ3 339 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 PRR31Q5SQ13 230 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 ZNF773Q6PK81 442 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 Q6YL49 198 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 VMO1Q7Z5L0 202 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 TMEM86BQ8N661 226 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 FAM216BQ8N7L0 139 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 AQP3Q92482 292 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 FCGR1BQ92637 280 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 TAF15Q92804 592 aaKnown RBP eCLIP12.49□□□□□ -0.41
VARS-223ENST00000474643 BORCS8Q96FH0 119 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 PDCD1LG2Q9BQ51 273 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 CHIAQ9BZP6 476 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 CHST5Q9GZS9 411 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 NEK6Q9HC98 313 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 BABAM2Q9NXR7 383 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 KAAG1Q9UBP8 84 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 CLEC2DQ9UHP7 191 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 DHDHQ9UQ10 334 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 POLDIP2Q9Y2S7 368 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 KPTNQ9Y664 436 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 POMT1Q9Y6A1 747 aa12.49□□□□□ -0.41
VARS-223ENST00000474643 A0A087WXM4 84 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 PQLC2LA1A4F0 135 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 TRIM64CA6NLI5 447 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 J3QT63 122 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 TNFRSF13BO14836 293 aaPredicted RBP12.48□□□□□ -0.41
VARS-223ENST00000474643 RHBDL1O75783 438 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 CD1AP06126 327 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 MELTFP08582 738 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 MMP9P14780 707 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 NDUFB7P17568 137 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 GABRA2P47869 451 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 FUT6P51993 359 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 CAPZA1P52907 286 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 WNT4P56705 351 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 GUCA2AQ02747 115 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 GPR50Q13585 617 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 BLMHQ13867 455 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 UBE2V2Q15819 145 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 RPL22L1Q6P5R6 122 aaKnown RBP12.48□□□□□ -0.41
VARS-223ENST00000474643 BRICD5Q6PL45 260 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 OR5T2Q8NGG2 359 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 OR51A4Q8NGJ6 313 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 OR10AC1Q8NH08 325 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 SEH1LQ96EE3 360 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 ADAT3Q96EY9 351 aaPredicted RBP12.48□□□□□ -0.41
VARS-223ENST00000474643 SLITRK2Q9H156 845 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 WDR13Q9H1Z4 485 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 DPAGT1Q9H3H5 408 aa12.48□□□□□ -0.41
VARS-223ENST00000474643 ZFPL1O95159 310 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 PRKACBP22694 351 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 ATP1B3P54709 279 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 CDK5R1Q15078 307 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 SPHARQ15513 63 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 TREML4Q6UXN2 200 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 ANGPTL5Q86XS5 388 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 KIR3DL3Q8N743 410 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 RPS4Y2Q8TD47 263 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 MED30Q96HR3 178 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 SIRPDQ9H106 197 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 SIRT7Q9NRC8 400 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 NLKQ9UBE8 527 aa12.47□□□□□ -0.41
VARS-223ENST00000474643 SLC25A10Q9UBX3 287 aaPredicted RBP12.47□□□□□ -0.41
VARS-223ENST00000474643 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
VARS-223ENST00000474643 A0A0U1RQK1 487 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 SYNGR1O43759 233 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 INMTO95050 263 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 NXPH2O95156 264 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 CYB5AP00167 134 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 MT-ND2P03891 347 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 CD2P06729 351 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 FBP1P09467 338 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 ATF1P18846 271 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 AZGP1P25311 298 aaKnown RBP12.46□□□□□ -0.41
VARS-223ENST00000474643 SOX2P48431 317 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 POU3F4P49335 361 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 RBP2P50120 134 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 MTCP1P56278 107 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 SMIM21Q3B7S5 101 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 UBE2UQ5VVX9 321 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 UTS2BQ765I0 119 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 SPARTQ8N0X7 666 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 BATF2Q8N1L9 274 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 POC1AQ8NBT0 407 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 TMEM185AQ8NFB2 350 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 TSPAN14Q8NG11 270 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 OR5D14Q8NGL3 314 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 OR13C9Q8NGT0 318 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 DYRK2Q92630 601 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 ZNF488Q96MN9 340 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 DNTTIP1Q9H147 329 aa12.46□□□□□ -0.41
VARS-223ENST00000474643 MGAM2Q2M2H8 2515 aa12.46□□□□□ -0.42
VARS-223ENST00000474643 PNMA8CA0A1B0GUJ8 204 aa12.45□□□□□ -0.42
VARS-223ENST00000474643 A0A1B0GW55 424 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms