RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TEX13DA0A0J9YY54 714 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF816-ZNF321PA0A0X1KG74 233 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM230AA0A1W2PPH8 454 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 LRRC3CA6NJW4 275 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF716A6NP11 495 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 EEF1E1-BLOC1S5C9J1V9 151 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 KRBOX1C9JBD0 128 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 PRSS44E7EML9 344 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 SOCS1O15524 211 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 BCL2L11O43521 198 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 SYNGR3O43761 229 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 SFT2D2O95562 160 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 MPC2O95563 127 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CRYZL1O95825 349 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 MT-CO3P00414 261 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 NRASP01111 189 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 IGLV3-1P01715 115 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 RLN2P04090 185 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 HPNP05981 417 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 RRASP10301 218 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF32P17041 273 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 HLA-GP17693 338 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CXCL2P19875 107 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CRYGSP22914 178 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 GABRR1P24046 479 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZBTB25P24278 435 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CD82P27701 267 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 S100GP29377 79 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 OTX1P32242 354 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ARR3P36575 388 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 FUT6P51993 359 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 P2RX3P56373 397 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 B3GALT5-AS1P59052 145 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 RPS18P62269 152 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 OR1C1Q15619 314 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 MICBQ29980 383 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 HYAL4Q2M3T9 481 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 GAGE13Q4V321 117 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 PLCXD3Q63HM9 321 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 OR52W1Q6IF63 320 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF774Q6NX45 483 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CFAP47Q6ZTR5 3102 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 MRPL21Q7Z2W9 205 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 SETXQ7Z333 2677 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 BIVMQ86UB2 503 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 WDFY1Q8IWB7 410 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 SGPP2Q8IWX5 399 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM89BQ8N5H3 189 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 KCNRGQ8N5I3 272 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM105Q8N8V8 129 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZIC4Q8N9L1 334 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CCDC71LQ8N9Z2 235 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZSCAN4Q8NAM6 433 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZBTB44Q8NCP5 570 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM104Q8NE00 496 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 OR2M7Q8NG81 312 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5AP2Q8NGF4 316 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 OR5D18Q8NGL1 313 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 OR13C8Q8NGS7 320 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 MARCH1Q8TCQ1 289 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ROBO4Q8WZ75 1007 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 RBPMSQ93062 196 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 NTNG2Q96CW9 530 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 FBXO17Q96EF6 278 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ARHGAP5-AS1Q96IT6 56 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ALKBH3Q96Q83 286 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 SPACA5Q96QH8 159 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 DHRS9Q9BPW9 319 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ARPC5LQ9BPX5 153 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 NICN1Q9BSH3 213 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF471Q9BX82 626 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 PECRQ9BY49 303 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 NMES1Q9C002 83 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ASXL3Q9C0F0 2248 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 ZNF703Q9H7S9 590 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 METTL8Q9H825 291 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 PROK2Q9HC23 129 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CHMP1AQ9HD42 196 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 TMEM9BQ9NQ34 198 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 GPR173Q9NS66 373 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 NECAP2Q9NVZ3 263 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 C1orf123Q9NWV4 160 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 FBXO9Q9UK97 447 aaPredicted RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 HSF4Q9ULV5 492 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 TNRC6BQ9UPQ9 1833 aaKnown RBP5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 KCNIP3Q9Y2W7 256 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 RHBDD3Q9Y3P4 386 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 AUP1Q9Y679 476 aa5.1□□□□□ -1.59
ATPAF1-204ENST00000474020 CABIN1Q9Y6J0 2220 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FER1L5A0AVI2 2057 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 CHD6Q8TD26 2715 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 IGKV3D-15A0A087WSY6 115 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 LNP1A1A4G5 178 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A10PA6NDY2 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A18PA6NE21 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A16PA6NEW6 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A20PA6NIJ5 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A8PA6NJQ4 464 aa5.09□□□□□ -1.59
ATPAF1-204ENST00000474020 FAM90A7PA6NKC0 464 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms