RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 UBE2QL1A1L167 161 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 SDCBPO00560 298 aaPredicted RBP15.38■□□□□ 0.05
VARS2-206ENST00000473916 AMY2BP19961 511 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 FAM27E3Q08E93 113 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 MAB21L1Q13394 359 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 CA10Q9NS85 328 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 SLC2A8Q9NY64 477 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 PLEKHA6Q9Y2H5 1048 aa15.38■□□□□ 0.05
VARS2-206ENST00000473916 RELNP78509 3460 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 NBEAQ8NFP9 2946 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 OR7C1O76099 320 aaPredicted RBP15.37■□□□□ 0.05
VARS2-206ENST00000473916 DUSP1P28562 367 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 UCNP55089 124 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 EIF2S3LQ2VIR3 472 aaKnown RBP15.37■□□□□ 0.05
VARS2-206ENST00000473916 SEZ6L2Q6UXD5 910 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 Q6ZPA2 131 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 NOXA1Q86UR1 476 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 ADGRG4Q8IZF6 3080 aa15.37■□□□□ 0.05
VARS2-206ENST00000473916 IL5P05113 134 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 RAC2P15153 192 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 OPRM1P35372 400 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 GNG3P63215 75 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 C2orf68Q2NKX9 166 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 LIX1LQ8IVB5 337 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 MUC20Q8N307 709 aaPredicted RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 WDR89Q96FK6 387 aaPredicted RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 PRRT1Q99946 306 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 OR51I2Q9H344 312 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 PLSCR3Q9NRY6 295 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 HSF4Q9ULV5 492 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 IQCF6A8MYZ5 107 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 FABP7O15540 132 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 AKR7A2O43488 359 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 CREBL2O60519 120 aaPredicted RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 RBMXP38159 391 aaKnown RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 Q8NFD4 153 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 MRPS24Q96EL2 167 aaKnown RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 ZNF486Q96H40 463 aaPredicted RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 SLC25A21Q9BQT8 299 aaPredicted RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 ADAT1Q9BUB4 502 aaKnown RBP15.36■□□□□ 0.05
VARS2-206ENST00000473916 OBP2BQ9NPH6 170 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 ZNF835Q9Y2P0 537 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 AMDHD2Q9Y303 409 aa15.36■□□□□ 0.05
VARS2-206ENST00000473916 OR5B21A6NL26 309 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 A8MXE2 369 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 M0R1B8 84 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 PDCD6O75340 191 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 IFNA6P05013 189 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 MPZP25189 248 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 CCKARP32238 428 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 CBX5P45973 191 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 FABP6P51161 128 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 MSMPQ1L6U9 139 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 C4orf46Q504U0 113 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 SAXO1Q8IYX7 474 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 OR5H2Q8NGV7 314 aa15.35■□□□□ 0.05
VARS2-206ENST00000473916 TRAPPC2LH3BP13 241 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 MLNRO43193 412 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 HOXD4P09016 255 aaPredicted RBP15.34■□□□□ 0.05
VARS2-206ENST00000473916 TBPP20226 339 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 FGF12P61328 243 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 HOXA4Q00056 320 aaPredicted RBP15.34■□□□□ 0.05
VARS2-206ENST00000473916 NAAAQ02083 359 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 TIMM23BQ5SRD1 257 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 ELP2Q6IA86 826 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 TMEM200AQ86VY9 491 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 MARCH1Q8TCQ1 289 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 MED30Q96HR3 178 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 CMSS1Q9BQ75 279 aaKnown RBP15.34■□□□□ 0.05
VARS2-206ENST00000473916 CHD3Q12873 2000 aaKnown RBP15.34■□□□□ 0.05
VARS2-206ENST00000473916 MEIKINA0A087WXM9 373 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 HSPB6O14558 160 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 CA11O75493 328 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 ZNF205O95201 554 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 FCGR3AP08637 254 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 OR4E1P0C645 316 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 ANXA3P12429 323 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 PRKACAP17612 351 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 NPY4RP50391 375 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 GMFBP60983 142 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 VAX1Q5SQQ9 334 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 ZNF573Q86YE8 665 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 MKXQ8IYA7 352 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 UXS1Q8NBZ7 420 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 ADAD2Q8NCV1 583 aaKnown RBP15.34■□□□□ 0.05
VARS2-206ENST00000473916 OR13G1Q8NGZ3 307 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 CHIAQ9BZP6 476 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 GPN1Q9HCN4 374 aaPredicted RBP15.34■□□□□ 0.05
VARS2-206ENST00000473916 EHFQ9NZC4 300 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 MGAT4CQ9UBM8 478 aa15.34■□□□□ 0.05
VARS2-206ENST00000473916 PURGQ9UJV8 347 aaKnown RBP15.34■□□□□ 0.05
VARS2-206ENST00000473916 SNRPGP15A8MWD9 76 aa15.33■□□□□ 0.04
VARS2-206ENST00000473916 C1QBP02746 253 aa15.33■□□□□ 0.04
VARS2-206ENST00000473916 ARL6IP1Q15041 203 aa15.33■□□□□ 0.04
VARS2-206ENST00000473916 Q6ZR03 302 aa15.33■□□□□ 0.04
VARS2-206ENST00000473916 SCCPDHQ8NBX0 429 aa15.33■□□□□ 0.04
VARS2-206ENST00000473916 RELL2Q8NC24 303 aaPredicted RBP15.33■□□□□ 0.04
VARS2-206ENST00000473916 RTL8AQ9BWD3 113 aa15.33■□□□□ 0.04
VARS2-206ENST00000473916 ICE1Q9Y2F5 2266 aa15.33■□□□□ 0.04
VARS2-206ENST00000473916 SHANK1Q9Y566 2161 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms