RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.94□□□□□ -0.66
CHD3-209ENST00000473376 LINC00312Q9Y6C7 94 aa10.94□□□□□ -0.66
CHD3-209ENST00000473376 FAM90A22PA8MWA6 464 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 G3V2T6 193 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 FBXO24O75426 580 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 ARG1P05089 322 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 HTR1FP30939 366 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 BMXP51813 675 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 OR12D2P58182 307 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 CDC42P60953 191 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 COL10A1Q03692 680 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 ZNF146Q15072 292 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 ATP6AP1Q15904 470 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 SPIN3Q5JUX0 258 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 CATSPERDQ86XM0 798 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 EGFL6Q8IUX8 553 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 TCEANCQ8N8B7 351 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 OR4M1Q8NGD0 313 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 SLC7A6OSQ96CW6 309 aaPredicted RBP10.93□□□□□ -0.66
CHD3-209ENST00000473376 ZNF488Q96MN9 340 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 ZNF714Q96N38 554 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 GABARAPL1Q9H0R8 117 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 PLEKHA1Q9HB21 404 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 MTCH1Q9NZJ7 389 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 FOXJ3Q9UPW0 622 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 SIGLEC9Q9Y336 463 aa10.93□□□□□ -0.66
CHD3-209ENST00000473376 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
CHD3-209ENST00000473376 METTL15A6NJ78 407 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 SYT7O43581 403 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 VSIG10L2P0DP72 767 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 COX7A1P24310 79 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 PEX2P28328 305 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 IL18R1Q13478 541 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 UBE2V2Q15819 145 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 DMRTC1Q5HYR2 192 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 KCTD20Q7Z5Y7 419 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 LHFPL4Q7Z7J7 247 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 ANGPTL5Q86XS5 388 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 C1QL4Q86Z23 238 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 ZDHHC13Q8IUH4 622 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 ASCC1Q8N9N2 400 aaKnown RBP10.92□□□□□ -0.66
CHD3-209ENST00000473376 WFDC9Q8NEX5 89 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 RFKQ969G6 155 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 ADI1Q9BV57 179 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 OR14J1Q9UGF5 321 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 GLS2Q9UI32 602 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 GTF2A1LQ9UNN4 478 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 UBE2J1Q9Y385 318 aaPredicted RBP10.92□□□□□ -0.66
CHD3-209ENST00000473376 SESN1Q9Y6P5 492 aa10.92□□□□□ -0.66
CHD3-209ENST00000473376 TRBV2A0A0J9YWF9 115 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 FUOMA2VDF0 154 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 G3V4G9 280 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 ISG15P05161 165 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 RPSAP08865 295 aaKnown RBP10.91□□□□□ -0.66
CHD3-209ENST00000473376 UBCP0CG48 685 aaKnown RBP10.91□□□□□ -0.66
CHD3-209ENST00000473376 FCGR1AP12314 374 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 CEBPDP49716 269 aaPredicted RBP10.91□□□□□ -0.66
CHD3-209ENST00000473376 RBP2P50120 134 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 ISL1P61371 349 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 SSX2Q16385 188 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 OR52W1Q6IF63 320 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 CCBE1Q6UXH8 406 aaPredicted RBP10.91□□□□□ -0.66
CHD3-209ENST00000473376 PLEKHG7Q6ZR37 379 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 UTS2BQ765I0 119 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 RTN4RL2Q86UN3 420 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 YIPF7Q8N8F6 280 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 OR8J1Q8NGP2 316 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 TRUB1Q8WWH5 349 aaKnown RBP10.91□□□□□ -0.66
CHD3-209ENST00000473376 CREB3L1Q96BA8 519 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 BORCS8Q96FH0 119 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 AKR1E2Q96JD6 320 aa10.91□□□□□ -0.66
CHD3-209ENST00000473376 FAM230AA0A1W2PPH8 454 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 A0A1W2PQL4 384 aaPredicted RBP10.9□□□□□ -0.66
CHD3-209ENST00000473376 MGST3O14880 152 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 CYB5AP00167 134 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 PRKACBP22694 351 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 FASP25445 335 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 RASSF2P50749 326 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 ATP1B3P54709 279 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 EDDM3BP56851 147 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 ACTA2P62736 377 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 ACTG2P63267 376 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 ACTC1P68032 377 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 ACTA1P68133 377 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 FAM189A2Q15884 450 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 FDX2Q6P4F2 183 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 ZNF782Q6ZMW2 699 aaPredicted RBP10.9□□□□□ -0.66
CHD3-209ENST00000473376 DYNAPQ8N1N2 210 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 CORO2AQ92828 525 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 SPSB1Q96BD6 273 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 CLEC7AQ9BXN2 247 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 CADM1Q9BY67 442 aaKnown RBP10.9□□□□□ -0.66
CHD3-209ENST00000473376 TMEM133Q9H2Q1 129 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 NECAP2Q9NVZ3 263 aa10.9□□□□□ -0.66
CHD3-209ENST00000473376 IGKV1-27A0A075B6S5 117 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 IGHV2-26A0A0B4J1V2 119 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 TMEM82A0PJX8 343 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 F2RL2O00254 374 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 PEX14O75381 377 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms